Oncorhynchus nerka (sockeye salmon): 115130917
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Entry
115130917 CDS
T07952
Name
(RefSeq) zinc finger protein ubi-d4-like
KO
K13196
zinc finger protein ubi-d4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115130917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115130917
03036 Chromosome and associated proteins [BR:
one03036
]
115130917
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115130917
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115130917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
PHD_2
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
115130917
NCBI-ProteinID:
XP_029518361
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All DBs
Position
LG6:51924291..51928554
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AA seq
407 aa
AA seq
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MAAAVDSVVKVLGEQYYKDAMEQCHSYNARLCAERSILMPFIDSQTGVAQSNCYIWMEKR
HRSAGMAPGQLYSYPSRRWRKRRRSHPPEDPRLAFPPIKSAELELGLKRDVVGTVDGSSL
EALLKGEPLERRGPPDPRAPEDNPATPEPVAATVSSHTSSGRIRKRVLDHDDYLDDLDDE
DFEDETPKRRGKGKSKGRGVGNGKKKMEAAAAALEEQDKPYACDICGKRYKNRPGLSYHY
THSHLAEEEGEDREEIESPPPRRQPEEHKTPKKGPNGLALPNDYCDFCLGDSAHNQKTGQ
SEELVSCSDCGRSGHPSCLQFTDVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDC
DRGYHMYCLKPPMTEPPEGSWSCHLCLALLKDKASIYKQQSPTTEDE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtagatagtgttgtgaaagtgctcggggagcagtactacaaggatgct
atggaacagtgccacagctacaatgctcgtctgtgtgcggaaaggagcatccttatgcct
ttcatcgactctcagacgggtgttgctcaaagcaactgctacatctggatggagaagaga
caccggagtgcaggcatggctcctgggcagctgtatagctatccgtctcgacgctggagg
aagagacggcggtcccaccctcctgaggacccccgtttggccttcccacctatcaaatca
gcggagctggagctaggtctgaaacgggatgttgtgggaacggtggacggcagcagcctg
gaggccctgctgaagggggagcccctggagaggaggggcccgccagacccccgtgccccg
gaggacaacccagccacacctgaacccgtggccgccacagtctccagccacacctcctct
ggacgcatccgcaagagggtgctggaccacgatgactacctggatgatctggatgatgag
gactttgaggatgagacccccaagagacgagggaagggcaagtccaagggtcgtggagtg
ggaaatggaaagaagaaaatggaggcagctgctgcagccttggaggagcaggacaaacca
tacgcctgtgacatctgtgggaagcgctataagaaccgtccgggcctgagctaccactac
acacactcccatctggcggaggaagagggggaggacagagaggagatagagtcccctccc
ccccggcgccagcctgaggaacacaagactcctaagaaaggccctaacggtctggccctg
cccaacgactactgcgacttctgtctgggagactccgcccacaaccagaagaccggccag
tcagaggagctggtgtcctgctcagactgcggacgctcgggtcacccgtcctgcctgcag
tttacagatgtgatgatggcagctgtgaagacgtaccgctggcagtgtatcgagtgcaag
tgctgcaacgtctgtggtacctcagagaacgacgaccagctgctgttctgtgatgactgt
gatcgaggataccacatgtactgcctcaagcctcctatgactgagcccccagaagggagt
tggagttgtcacctttgcctggcgctgctgaaggacaaggcatccatatacaagcagcag
agccccaccacagaggatgaatag
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integrated database retrieval system