Oncorhynchus nerka (sockeye salmon): 115130993
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Entry
115130993 CDS
T07952
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115130993 (rlim)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115130993 (rlim)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115130993 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115130993
NCBI-ProteinID:
XP_029518472
LinkDB
All DBs
Position
LG6:54525615..54535954
Genome browser
AA seq
745 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGEPTEPAEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARADVETGEGEAQEEGP
AEAPGDGVEAVVGVEVQAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGT
GAPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEAEMVPELVVEVVPQPPSPVTATPPV
SRPASPLVQATPAPAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLDG
LPRHVPNAAPSHSPPTLPPQSPAEGSSRTRQHVLSRQSTAEYDVQSAGTGSDTGSGNAPE
PGTTPPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTF
LYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGFG
ELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVAGMAEGAEPPVSVGGPSVGGA
GEARTEEGEEGVGVGLAPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFLLND
EDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDR
WLSENSTCPICRRAVLVSANRESVV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaagccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccgacagaaccggcggaaggt
ccagaggacccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcaccgaggcaaccagtcatggcgggcagtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggcc
gagcagcaggcccgcgccgatgtggagacgggcgagggggaggctcaggaggaaggccca
gcagaagcacctggcgatggggtggaggcagtggtcggagtggaggtccaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
ggggcgcccatggagacaggagaggtgctggaggaaccagttgtggaggagatggctgtc
atagtggaaccagaagcggagatggagccagaggctgaagtagaagcagagatggtccca
gagttagtagtagaggtagtcccacagccgcccagccctgtcaccgccacccctccggtc
tccagaccagccagtcccctggtgcaggccaccccggccccagccccccccagcccgccc
cctgaggagcctccccgacggggccagagacgagcccgcagccgtagccctgagcagcgc
cggaccagggctcgcaccacacggagccgttcccctctcaccctggaccgactggacggc
ctcccccgccacgtgcccaacgccgccccttcacacagcccccccaccctgcccccccag
tcccccgcagagggaagctcacggactcgacagcatgttctgtcccggcaaagcactgca
gagtacgatgtccagtcagccggaacagggtctgacacagggtctgggaacgccccagag
cccggtaccaccccaccccaggagggagaggccgcgggcggggagggagcagcaggacga
cgtccccccaccatcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgc
cagagggacagcattgctaacagaacccgctcacgctcccagaactccaacaacaccttc
ctgtacgagagtgagaggggggggttccgcaggaccttctcccggtccgagcgtgctggt
gtgaggacgtacgtcagcaccatcaggatccccatcaggaggatcagtgatgcagggttg
ggagaggccacctccatggctctgcagaccatgatacgacagatcatgaccggcttcgga
gagctcagctacttcatggactcggactctgactcctcggactcaaaccgtggcggtggt
aaccccactggcgctgccgacctggcagaggcgctcaacactcccgacgggggagtagcc
ggcatggcggagggggcggagcctcctgtctcagtgggtgggcctagtgtgggaggagcc
ggggaggcaaggacagaggagggggaagagggggttggtgtaggtctggccccagggata
ggtttaggggtggggggcacccccagggaggggcgagctcggccccgtgcccccatcagt
ctggaggaaccagggtcgctacccttcctccgccttgctcacttcttcctcctgaatgat
gaggatgaggaacagcccagaggactcaccaaggagcagatcgacaacctctccaccagg
aactttggggagagtgatgctctgaagacctgcagtgtgtgtatcacagagtatgctgag
gggaacaagttgaggaagttgccctgttctcatgagtaccatgttcactgtatcgaccgc
tggctgtctgagaactccacctgtcctatctgccgcagggctgtgttggtgtctgctaac
cgggagagtgtggtctag
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