Oncorhynchus nerka (sockeye salmon): 115131178
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Entry
115131178 CDS
T07952
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115131178
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115131178
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
Ig_2
ig
LRR_5
fn3
Ig_VEGFR-1-like_5th
LRR_14
C2-set_3
V-set
LRRNT
New_glue
C2-set_2
Motif
Other DBs
NCBI-GeneID:
115131178
NCBI-ProteinID:
XP_029518633
LinkDB
All DBs
Position
LG6:complement(43373306..43384505)
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AA seq
641 aa
AA seq
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MHLLLYAHVFLCCFSVAHSFCPSQCTCVYHGRSDGTGTRSVLCDDPDMSDIPVNVPVDTV
KLRVEKTGVRRIPTEAFYYLNDLRYLWITYNSISSVDAAAFYNLKVLHELRLDGNLISTF
PWESLKEMPSLRTLDLHNNRLTSVAMEAIPYLVNITYLDISSNKLTTLSSDLVDIWPPFN
GMPVSSSLSQKVVLGLQDNPWICDCRISKLIELSKMSDTSVVLMDQFLSCSGPENLAGVM
FQRAELDQCLKPSVMMSATKITASLGSNVLLRCDATGYPTPTLIWTTSDGSPVNNTVVQE
SPGEGVRWSIISLNGISYKDNGEYSCKAKNFAGNAEAAISLSVAGYVASTMPPQRSNGET
GGSSPSTTSSAPATDFSNSPSTLITTTTPATTTLPPVPTKKKLMPSNVQQKAPPKPSKIQ
QGSDRMLAADQSKKKDASKSVQDLEIVEETADSAVLLWTADGLQSDAPLTVVYSTYDDED
DSKRTMDTDAGSGKVLLEGLTSGMRYQVCLVAKGSAAGIDPCINFFTLDIVEDDAENQLL
MLISGIACTVALPVIGLLVYKILSLYCQGSVPGLDDELSKDTYLKFETLSMKQRTLNANP
SELWAHRQTEESQERMLLFSRSSIDSQMTYRSDSSRSEFLC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcttctctacgcccatgtctttctgtgctgcttcagtgtggcccattccttc
tgtccttcccagtgtacctgtgtttaccatggacggagtgatggaacggggaccagatct
gtgctgtgtgatgacccagacatgtccgacatccctgtaaatgtccctgtggatacggtc
aaactgcgggtggagaagacaggcgtgaggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctacaactctatctcctctgtggacgccgccgcc
ttctacaacctcaaggtcctccacgaactgcggctggacgggaatctgatctccactttc
ccctgggagtccctaaaggagatgcctagtctgaggacgctggatcttcacaacaaccgc
ttaaccagcgtggccatggaggctatcccgtacctggtcaacatcacctacctggatatc
tccagcaacaagttgaccactctgtcttcggacctcgtggatatctggccgccgttcaat
ggaatgcctgtctcctccagcctgtcccagaaagtggtgctcggtcttcaggacaacccg
tggatctgcgactgcaggatctccaagctgatcgagctctccaaaatgtctgacacatca
gtggtactaatggatcagttcctgtcttgcagtgggcctgagaacctggccggggttatg
ttccaaagggcggagctggaccaatgtctcaagccgtctgtcatgatgtcagccaccaag
attacagcctcgttgggcagcaatgtgcttctgcgctgtgatgccacgggttaccccaca
cctaccctaatctggaccacttcagatggctcacctgtcaacaacacagttgtccaggag
tctccgggagaaggtgtccgatggtcaatcatcagcctaaatgggatctcgtacaaagac
aacggggagtacagctgcaaggctaagaacttcgccggtaatgcagaggctgccatcagc
ctgtctgtggcaggttatgtcgcttcaaccatgcccccacagaggtccaatggagagact
ggagggagtagcccatccacaacatcctctgctccggcaactgacttctccaactcccct
agcaccctgattaccactaccaccccagccacgaccacactgccacccgttcccaccaag
aagaaactcatgcccagcaatgtgcagcagaaagccccacccaaaccatccaagatccag
caaggcagcgacaggatgctggcggcggatcagagcaaaaagaaggacgcttccaagtcc
gtccaagatctcgagatcgtggaggaaacggcggacagcgcggttctactctggacggca
gacggtttgcagagcgatgcccctctcaccgttgtgtactctacttacgacgatgaggac
gactccaaacggacaatggatactgatgccgggagtggcaaggtccttctcgaaggctta
acttctggaatgaggtaccaggtttgtctggttgccaagggaagtgcggcggggatagac
ccctgcatcaacttcttcaccctggacattgttgaggacgatgccgagaaccagctgctg
atgctcatcagcggcattgcctgcaccgtggctttacctgtcatcggtttgctggtctac
aagatcctctcactctactgccagggcagtgtgccaggtttggacgacgagctgtctaaa
gacacgtatttgaagttcgagacgctgtcgatgaagcagaggaccttgaacgctaatccc
agtgaattgtgggcccacaggcagaccgaggagtcccaagagaggatgctcctcttctcc
aggtccagcattgactcacaaatgacatacaggagtgacagttccaggtcagaatttctg
tgctag
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