Oncorhynchus nerka (sockeye salmon): 115131243
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Entry
115131243 CDS
T07952
Name
(RefSeq) sorting nexin-13-like
KO
K17925
sorting nexin-13
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115131243
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115131243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Rep3_C
DUF3802
Motif
Other DBs
NCBI-GeneID:
115131243
NCBI-ProteinID:
XP_029518675
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Position
LG7:complement(522954..575104)
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AA seq
822 aa
AA seq
DB search
MFAEASLSVWGWGGLGVVLFLITFGPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLE
RCEHSYLPATHTGILKTLDEMRLEPKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDDSFLLEIRQTVQNALVQFSTRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLE
DSKQRDLSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFH
NKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSRCNYEAFMTCLCRSGTLAS
SSSESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFISDTGVCNDHGKTYALYAITVLRRN
HDGSEDSWKTYRRYSDFHDFHMRITEQVKFENLTAILKLPGKKTFNNMDRDFLERRKKDL
NSYLQLLLNPEMMKACPTLVHYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNA
VKGLPDSLAGGMNKAADNMGRMSEKLGQDIKQAVFKVPPMLPKSDFDPEHCRVSAQLDDN
VDDNIPLRVMLLLMDTETLSTDTHTHTHSSAPHTETLSTGTTHTHTHTLIHQRHIRRHYQ
QVPHTHTHSFISATYGDTINRYHTHTHTHSSAPHTETLSTGTTHTHTHTLIHQRHIRRHY
QQVPHTHTHTHSFISATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESP
PRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVL
LEGFLETLFPHYKFPELFVKLHSRSPRTARYTQKVKSNFPKR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttc
ctcatcacttttggacccttcgctgtcttctacctggccttctatatcttctgcttcgta
ggaggtggttttgcggtcactctgttgtttgggaaaaccaactcagagagacatctagag
aggtgtgaacactcctatcttccggccacgcacacgggtatactgaagacattggatgag
atgagactggagccgaagcctatacagatagacaggagactgactggctccaactacata
gacgagcctcttcaacaggtcatccagtttgctttgagagattatatccagtactggtat
tacactctgagtgaggatgattcttttctgctggaaatcagacagacggtccagaatgct
ctggtacagttctccacacggtctaaagaggtggactggcagccttatttgaccaccaga
ctggtggatgactttgctactcaccttcgagtcttcagaaaggcccaagacagactggag
gacagtaaacagagggacttgtcagaggagatggtggagtcattctttgaggcggaggtg
gagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggatgaagaaggg
ttcctgagggatctgtgtgaggtgctgctctacctgttactacctcctggagacttccac
aacaagaacatgagatacttcctcagggagattctggcgcgaggcgttctccttcccctg
gtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatgatccgggac
tctcgctgtaactacgaggcttttatgacctgtctgtgtagatccgggactctcgcttct
tcctcttcagaatcgttcaacggttctccaacaggaagcattaatctgtctctagatgac
ctgtcgaactcctgccatgatgacaatatacagctacacgccttcatctctgatacaggg
gtgtgtaacgaccacggcaagacctacgccctctacgccatcactgtgttgcgccgtaac
cacgacggcagcgaagactcctggaagacctaccgacgctactctgacttccacgatttc
cacatgaggatcacggagcaggtgaagtttgagaatttgacggcgatcctgaagctgccg
gggaagaagacgttcaacaacatggacagagacttcctggagaggaggaaaaaggacctg
aactcgtacctacagctgctgttgaatccagagatgatgaaggcctgtcctactctggtt
cactacgtctacgacttcctggagaataaacagtacagcaaggggaagggagatttcgct
cgcaagatggatacgtttgtgaaccccttgcgtagctcgatgcgtaacgtgtccaacgct
gtgaagggcctgccagacagtctggctggagggatgaacaaggctgctgacaacatggga
cgcatgtcagagaaactgggacaggacataaaacaggccgtgttcaaggtgcctccaatg
ctccccaagtctgactttgacccagagcactgccgagtctcggcccagctggacgacaat
gtagatgataacatccccctgcgtgtgatgctgctgttgatggatacggagacactatca
acagacacacacacacacactcattcatcagcgccacatacggagacactatcaacaggt
accacacacacacacacacacacactcattcatcagcgccacatacggagacactatcaa
caggtaccacacacacacacacactcattcatcagcgccacatacggagacactatcaac
aggtaccacacacacacacacactcattcatcagcgccacatacggagacactatcaaca
ggtaccacacacacacacacacacacactcattcatcagcgccacatacggagacactat
caacaggtaccacacacacacacacacacacactcattcatcagcgccacatacggagac
actatcaacaggaagatcgtggatcatgtggacttcatgacagctccagaacaggtggcc
gactacgtcaagaagttccgggattcgtactggcccaacggaatcctggccgagtctccg
ccacgcagggacaagaacatccgcatgaggacgagggtcgcggccaagaccaacctattg
ggaatcatgccagatgagttgaagcacatcatcggggcggatacgactcgtaagggaatc
ctgcgtgtgtttgacatgttccaacacggaccaatgaatcgtcggctggtctacgtgctc
ctagaaggcttcctggagaccctgttccctcactacaagttccctgagctgtttgttaaa
ctccactctcgctcgccgcgcacagccagatacacacagaaagtcaagagcaacttcccc
aagaggtga
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