Oncorhynchus nerka (sockeye salmon): 115131289
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Entry
115131289 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquilin-4-like
KO
K04523
ubiquilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115131289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115131289
03051 Proteasome [BR:
one03051
]
115131289
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115131289
Proteasome [BR:
one03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115131289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
CUE
UBA_HOIP
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
115131289
NCBI-ProteinID:
XP_029518730
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Position
LG7:complement(2041938..2052143)
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AA seq
597 aa
AA seq
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MEDNGGEDPVNNNNDTTVSSDGSIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASSSTSCTSQVGSSSGS
SSGPSSAAHSSTVGSTGGPASAPPQTPNILTGFGDLSSLSSMGMGSANFMELQQQMQSQL
MSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFSAL
GGNSDGGVQPSRTENREPLPNPWGPPSSTNPSEGGGGTGTTGSSTTGSTNPSVSNPLGVN
SASLGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDMASQVLMNNPL
FAGNPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPS
LAPGGLPGGLPGGLVGGLPGGIPTTPLSVGGGVAPENPASSQSAGTNPAQQLMMQQMLQM
FAGGNASSQTPEVQFQQQLEQLGAMGFINREANLQALIATGGDVNAAIERLLGSQPS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaacggcggtgaagatcctgttaataacaacaatgatacaacggtatcttcg
gatggatctattattaaggttacagtcaaaaccccgaaagataaggaagaaatcgccata
tcggaagatgcctcggtcactcagtttaaggaggagatctcgcggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatcctgaaggacggggactcgctcaac
caacacggcatcaaggacggcctgacagtccacctggtcataaagacggcacacaaggca
ggagatggtgctagttcctccacctcctgcacctcccaggtaggcagcagtagtggcagc
tcctcgggccccagttctgcagcccactcctccacagtagggtccactggaggccctgcc
tcggcacccccacagacccccaacatactgaccgggttcggtgacttgtccagcctgagc
agtatgggcatgggctcagctaacttcatggagctgcagcagcagatgcagagccagctg
atgtccaacccagagatgctgtctcagatcatggagaaccccctggtgcagaacatgatg
tccaacccagacctgatgaggcagatgatcgtggctaaccctcagatgcagcagctgatg
gagcgtaaccccgagatctcccacatgctcaacaaccccgagcttatgagacagaccatg
gagctggccaggaaccctgctatgatgcaggagatgatgcgtaaccaggatcgggcgctt
agcaacctggagagcatcccggggggctacaacgccctgcgaaggatgtacacagacatc
caggaacccatgttcagcgccgcacgagaccagtttggaaacaaccctttctcagccctg
gggggcaactctgatgggggggtgcagccatcgaggacagagaaccgggaaccactgccc
aacccatggggcccccccagctccaccaacccctctgagggtggagggggcacgggcacc
acaggctcctctaccactggcagcaccaaccccagtgtctccaaccctcttggtgtcaac
tctgccagtctgggaaatggcatgttcagcagtccaggcatgcagagtctgatgcagcag
atttcagagaacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatg
atgcagtctctggcccagaacccagacatggcctcccaggtgttgatgaataatcccctt
tttgctggaaacccccaactgcaggaacagttcaggagccagctgccggtcttcctgcag
cagatgcagaacccagaggcactctctgtcatgaccaacccccgagccatgcaggctctc
ctccagatacaacagggtctacagacgctgcagacagaagcaccgggactcatgcccagt
ttggcaccgggtgggctgccaggtggtctaccaggggggctagtaggtggattaccaggt
ggaatacccacaacccccctgtccgtaggagggggtgtggctccagagaaccccgcctct
tcgcagagcgccggaacaaaccccgcccagcagctgatgatgcagcagatgctccaaatg
ttcgcaggagggaatgcctcgagccagaccccggaggtgcagttccagcagcagctggag
cagctgggtgctatgggcttcatcaaccgagaggccaacctgcaggccctcatcgctaca
ggaggagatgtcaacgctgccatcgagagactgctgggctctcagccctcataa
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