Oncorhynchus nerka (sockeye salmon): 115131300
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Entry
115131300 CDS
T07952
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
one03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115131300 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115131300 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115131300 (nup153)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115131300 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
115131300
NCBI-ProteinID:
XP_029518751
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All DBs
Position
LG7:complement(2476498..2501219)
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AA seq
1461 aa
AA seq
DB search
MVNAMTGQLEQLSGAESIFNLAMAATGGGKIRSRRCHSASKPYAKSKQQQPGLISRVTDT
VKSIVPSWLQKYFRNGEAAEGGGALVGAEQNSQAPPPNGSEEVPPLPDGRDTPEPGTSNT
EPSTSRASLNFQDVLSRPPLNRSHLHFPSLDTSLARRGPSSLFSQPSTSSAPFVGASPSF
SLVKEIKDNSSQHEDDNISTTSGFSSRASDKDVPNSKTASLPQLWSPEMDRTHSGPQQSQ
SSLKKPAFNLSVFGTSSTVSVSQSSQSSTSTMNSSVLNSSQLGDSPFYPGKTTYGGAAAV
RTARSRTAIPYQAPLRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTV
SSPLSTSLDGSTLHLSHFQAKKKLLDSPLPPVQKLVIPAAASVSGNRSMSFRPSLTPGGL
ARTPRDTPTRQSPLIPEAVAGPSQSTSSILPTYPLSSTPAFSSTGSGGGKMKRERTSTRP
SSKRPEDQIAELSDLPAISLPHSPSFSLPSFSFFQPPTATVTPTAALTTSPVLEEPIRNK
VPPTTAPSTPPSTPFTFSSPIVMATAASPPSFSPSSGFTFSAPVVKTGLSLSNGKMATPV
LAAVKHAASESMDEFEGPFKPAKVLKQGSVLDLLNGPGFAVPVTQTSPVPKAHQETPALS
TNTPSLGDLFKATTGSWDCDTCVVQNKPTDTKCVTSVTPRLNSGSSLAKTDSIPLLSGLE
GSTTTTTPAATFGALFTKPAGSWDCDTCLVQNKPDAVKCVACETTKPGTGVKTTLTMPAF
LEAKTLPAAAPLLGFGDKFKKPEGAWECGVCMVQNKAQDTKCVSCGIAKPGSETREQPGA
TAAPPSLTPTPVSATPLLGFGAQFKKPEGAWECDVCCVENKGADKECVACQTPKPGAKVE
PKAFGSSSFGIQSSSDSGGFKFGMGASSDSGSGGFKFGGTLLDSSSSGGFKFGASASSDS
TSTDTSSSAGFQFGGSSEGCKFAASAASTPAVDEGKKAEAPGMGAGFKFGVGLSFGTAAA
ASTESKPPYSGFSFHLVATSDSSSSTFSLPVSTENDSGASTETTTTTTTAAAPMFGKLAE
AKATALTTPLGGSIFRESLEKDKAPSFTFGKHEKEVASMGSGFLFSVPSKEGVASAPSTG
FSFSKPDPPKDQPNAPALAFEKPEDQSETPAAEAPKPSFSFGQSTTDAAAPKPAFGFMAS
TTTSSSSSSTPAPAPIPAPSTFLFGQSASTEATPAKSFLFGQSQDSLPAPAVSLNPGPAQ
PFLFGSGPNAAAPSFTFGAAAPSTAAPSAAPAPFVFSPASSTGFGSGQAPNFGQGTPHPS
APAFGSPAPSPFSATATQPPAFGAKPNSVPVFGHQANSTPAFGSSVPTTPGGGFQFGGAS
VFGTSSNSTGVFAFGGAPGGSPAPSATPSIAPQPSAPGSGFNFAAPPTFNIGSKSTTFTA
AATGQNSIPGRKIKTAVRRKK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgctatgacaggacagttggaacagctatccggtgccgagtcgatattcaat
ctagccatggcggccacgggtggagggaaaattagaagcagaagatgtcatagcgcttcg
aaaccttacgccaaaagcaaacagcagcagcctggcttgattagtcgagtgacagacaca
gtcaagagcatcgttccttcttggctgcagaaatacttcaggaatggggaggctgcagag
gggggaggggccttagtgggggcggagcagaacagccaggcccctcccccaaatggcagc
gaggaggtaccaccccttcctgatggacgggacactccggagcccggtaccagcaataca
gaaccttcgacaagcagggcatccctgaacttccaggatgttctgtctaggccccccctc
aaccgctctcacctccatttcccctccttggacacctccctggcccgcaggggccccagc
tctcttttctcccagccctccacctcctctgcccccttcgttggggcctcgcccagcttc
tcccttgtcaaagagatcaaggacaacagctcacagcacgaggacgacaacatctctacc
accagcggcttctcttcacgtgcatcagacaaagatgtacctaattcgaagaccgcatct
ctaccccagctctggtccccggagatggaccggacccactctgggcctcagcagtcccag
tccagtctcaagaagcctgcgttcaacctgtctgtctttgggacgtcctccactgtgagt
gtcagtcagtcaagtcagtcctccacttctacaatgaacagttcagtgctgaattccagt
cagttgggggattcccccttctacccagggaagactacctacgggggagcggctgctgtt
agaacagcccgttcacgcacagccataccttaccaggctccattgcggagacagatcaag
gccaagcctgctggggctcagccctgtggggtgaccagcgctaccgcccgacgcatccta
cagtccctggagcgcatgtccagccccctcgctgatgccaagagaatcccctctacagtt
tcctctcccttatcaacatcactggatggcagcactctacacctttcacattttcaggcc
aaaaagaaactgctggactctcccctccccccagtccagaagctggtgatcccggcggca
gcgtcagtgtcggggaaccgttccatgtccttcaggccctctctgacccctgggggcctg
gctcggacccctagagacacgcccacaagacaatcccctctgattcctgaagcagtggca
ggtccttctcaaagcacaagcagcattctacccacctaccctctgtccagcactcctgca
ttcagcagcacagggtcaggaggtgggaagatgaagagggagaggaccagcacaagaccc
tcttccaaacgtcctgaagaccagatcgctgagctatcggacctgccagccatctcgctc
ccccacagcccgtccttcagtctgcccagcttcagcttcttccaacctcccaccgccaca
gtcactcccactgccgctctcactacctcacctgtcctggaggagcccatccgtaacaag
gtgccaccgactacagccccctctacccctccctccacacctttcaccttctcctccccc
atcgtcatggcaactgctgctagcccaccgtccttctccccgtcttctggatttaccttc
agtgcacctgtagtgaaaacgggtctgtcactatccaacgggaagatggccaccccagta
ttggcagcagtgaagcacgctgccagtgagagcatggatgagtttgaagggccatttaaa
ccagccaaggtgttgaaacagggcagtgttctggacctcctgaatggacctggatttgcc
gttcctgttactcagacctcccctgtccccaaagcccaccaggagaccccagcactgtcc
accaacaccccctcccttggggacttgttcaaagcgacaacaggttcctgggattgtgac
acctgtgtggtgcagaacaaacccactgacaccaagtgtgtgacctctgtgaccccgcga
ctaaactctggctcctctttagcaaaaaccgacagtatacccttgttgtccgggctggag
ggttccaccaccaccactactcccgctgcaacttttggggccttgttcacaaagcctgca
ggaagctgggactgtgacacttgtctggttcagaacaagcctgatgctgtcaaatgtgtg
gcctgtgagacaaccaagcctgggactggagttaagaccacactgactatgcctgccttc
ttggaggctaagactctgcccgctgctgccccactcctgggctttggagacaagtttaag
aagccagagggagcatgggagtgtggcgtgtgcatggtgcagaacaaggcgcaggacacc
aagtgtgtttcctgtgggatcgctaagccaggtagtgagacgagagaacaacctggagca
acggctgcgcctccatctctaactcccacccctgtcagcgccacacctctattaggcttt
ggggcccagttcaagaagccagagggagcgtgggagtgtgatgtgtgctgtgttgagaac
aagggagcagacaaggagtgtgtggcctgccagacccccaagcctggagctaaagtagag
cccaaagcatttggttcctcatcgtttgggatccagtcctcttctgactcggggggattc
aagtttggcatgggggcgtcatcggactctggttctgggggcttcaaattcggcggcacc
ctcttggactcctcatcttcagggggcttcaaatttggtgcatctgcctcatcggactct
acctcgacagacaccagcagctctgcaggcttccaatttggaggctcctctgagggatgc
aaatttgcagcttcagctgcttccacccctgcagtggacgaggggaagaaggctgaagcc
cccggtatgggtgccgggttcaaattcggcgttgggctctcgttcggcactgcagcagct
gctagcacggagagcaaacccccttacagtgggttctcctttcatctggtggcaacctct
gattcctcctcctctactttcagcctccctgtttctacagagaatgacagtggagcttct
acagaaaccacgactaccaccaccacagcagcagcgcctatgtttgggaagctggctgaa
gccaaggctactgcgctgaccacaccactagggggcagcatattcagggaatcactagag
aaagacaaggccccttctttcacctttgggaagcacgagaaggaggttgcttctatgggt
tctgggttcctgttcagtgttcctagtaaagagggggtggcatcagctccatctactggc
ttttccttcagtaagccagacccacctaaagaccagcccaatgcacctgccttggccttt
gagaagccggaagaccagagtgagaccccagcagcagaagcacctaagccctcattcagc
tttgggcaaagcacaacagatgctgcagccccaaagccagcatttgggttcatggcaagc
accaccacctcttcttccagcagctctacccctgccccagcccccatcccggcccccagt
accttcctgttcgggcagagtgcctctactgaggccaccccagccaagtccttcttgttt
gggcagagccaggacagcctgcctgcccctgcagtctctctgaaccctggcccggctcag
cccttcctgtttgggtctggacctaatgctgctgctccctccttcacttttggagcagcg
gcaccctccactgcagctccatcagcagcccctgctccatttgtattcagccctgcctcc
tccactgggtttgggtcaggacaagctcctaactttggtcagggcacccctcatcccagt
gccccagcgtttggttcccctgccccgtcccccttctctgccactgccacccagccccct
gccttcggagccaagcccaactctgtccctgtgtttggccaccaagccaactccactcct
gcttttggctcatccgtccccaccacaccaggtggaggtttccagttcggcggagccagt
gtgttcggcacctccagtaacagcacgggggtgtttgctttcggaggggcaccaggaggg
tcccccgccccttctgccacgccctccatcgcaccccaacccagtgcacctggaagtggt
ttcaacttcgcagcgccccctaccttcaatattggatcaaagagcaccaccttcactgca
gctgccaccggacagaactcaatccccggtcgcaagatcaaaacagctgtccgacgtaag
aagtaa
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