KEGG   Oncorhynchus nerka (sockeye salmon): 115131311
Entry
115131311         CDS       T07952                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
  KO
K10881  26 proteasome complex subunit DSS1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03050  Proteasome
one03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    115131311
  09124 Replication and repair
   03440 Homologous recombination
    115131311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115131311
   04131 Membrane trafficking [BR:one04131]
    115131311
   03051 Proteasome [BR:one03051]
    115131311
   03400 DNA repair and recombination proteins [BR:one03400]
    115131311
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     115131311
Membrane trafficking [BR:one04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    115131311
Proteasome [BR:one03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     115131311
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     115131311
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 115131311
NCBI-ProteinID: XP_029518772
LinkDB
Position
LG7:2665564..2680284
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGSKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagactgtggatttgggattattagaggaggacgatgagtttgaa
gaattcccagctgaggattggacgggtctggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaacgtagaggatgacttctctaatcaactccgagcggagctg
gagaaacatggttccaagatggagacgtcgtag

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