Oncorhynchus nerka (sockeye salmon): 115131342
Help
Entry
115131342 CDS
T07952
Symbol
dennd3
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115131342 (dennd3)
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115131342 (dennd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_LRRK2
Beta-prop_EML_2
WD40_WDHD1_1st
dDENN
DUF5074
uDENN
WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
115131342
NCBI-ProteinID:
XP_029518836
LinkDB
All DBs
Position
LG7:4997013..5041425
Genome browser
AA seq
1309 aa
AA seq
DB search
MADIPSGLLEACVVVGAANDKLREVHQSHQQGKIKELPLLGAEVLQVHAPPFVTKESASS
ETNGHAPAFSRVQRRRSFIKKKKERAGIANGETAKSSDGGGTTTEDISVPKDLDLIALPQ
LCFPGGLQIASEQREDSYHYLVFTDVFGNRTHAVVVQYYRPIQDVGHQNGHPSSSKSSRL
YTAYGICVISKYPYYNALRDCLSCLLTQLKPSWMGDFEERVKEFSAKLALVPIPPPGQLH
VVFNLRPLQIGLPSREDKDRPAVDLDLHLPFLCFRPRQLLQIITSLLIEQRVVLLSCDWA
RLTLLAESLMLFIHPLVWQHPFVPILSRQMLDFLMAPTAYLMGCHLHHYEEVAAEVAAET
DDLILVNIDDGTVSSSWSDGIDLPDVPLAAAECFITRVEGLQVHYDLEVCHLGDSTEVNA
RRAQRKQWQSKLNTHIQNITLELIVNIFREVHDHLNYEHRVFNSEEFLRSRETADQPFYK
KVLDTHIFHSFLRDRLTRKMDAFTRMELSTRTEAYRLRSMTESPRRPTMQELARKYTSPE
SRLSKRLGASLPNLGESGGSLVGPLRQTSFKNIQVDSGMKSPQRPVRFFKLPEFPPPLAY
HYVQNYYQEMITLLGKAISGVASGDSSLLARYHYLRGFVNTVAGKRLDALEDFQNLYKTD
TDIFPGELVNALVDSLQEGEQALADRRPEIKHLISRVKRDHERERERHVDEGVKRFQLPK
KHMQLEDFVRHVQESGIVKDQGTIHRLFEALTVECCKSSLGWHGGGGGSAVKASSQSIFY
LDSNLEGQQKQVDPEIFRVFYTFWKETEAEAQEVALPASALEHLEANECVFKLSSSVKTS
HGVGKIAMTQRRLFLLTEGRPGYMEVTKFRDIEEVKISSAPFLLLRIPSLKIKTTLRKET
FEVNLKSEVDLWHLMVKEMWAGRKMADDHKDPQYMQQALTNALLMDAVVGCLQSQKAIFA
ATKLAHFDRMKLEVPLMVPKSTSETLKHKINPSLGLTSPQAVDVLLYTPGQLGVSSDSEG
DGNPKLWCALSDGKVVVFDAASWSMQQNQVQVGTSRVNCMLGVDRQQVWIGSQDSVIYII
STRSMSCNKQLTDHRSEVTGLSLGECSEKYSPKVAYSCSAEGAVIVWDVSTLQVRKQFRV
SCDRLQSVQLCNGTLWCCARDCIMEVWKNGMLHRKISLPEQLCGSPTAFSSLLLYHEREQ
LWTACIDVGELCVWHLREPTKPFQRIQLPDCAGVTCLIKVKNQIWVGGRGWSSGKSRGKI
YVVDAQRHTVEKELVAHTDCVQALCSAEDRYVLSGAAREDGKIAIWKVE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattccctctggactgctggaggcttgtgtagtggttggagcagccaacgat
aaactcagggaagtccatcagtcccatcaacagggcaaaatcaaagagcttcccctgttg
ggggcagaggtactacaggttcacgccccaccttttgtgaccaaggagagtgcgagtagc
gagaccaatggtcatgccccggccttcagcagggtccagaggaggcgctccttcatcaag
aagaagaaggagagggctggaatagctaacggagagacagccaagagtagcgatggaggc
ggcaccaccacagaggacatcagtgtccccaaggacctggacctcatcgccctgcctcaa
ctctgcttcccaggtggtcttcagatagccagcgagcagagagaagactcgtaccattac
ctggtgtttactgatgtctttgggaacaggacacatgctgtagtggtgcagtactacagg
cctatacaggatgttgggcaccaaaatggccacccgtcgtcctccaagtcgtcccgtctc
tacacggcatacggcatctgtgtaatctctaaatatccttactacaacgctctccgggac
tgcctgtcatgtctcttgacccagctcaagcccagctggatgggggactttgaggagagg
gtgaaggagttttcagccaagctggcgctggtgcccattcccccacctgggcaacttcat
gtggtctttaacctcaggcctctccagattgggcttccctcccgggaggataaggaccgg
ccggctgttgacctagacctccatctgcctttcctgtgctttagaccccgacagctcctc
caaatcattaccagcctgttgatagagcagagggtagtactgttgtcctgtgactgggcc
cggctcaccctgctggcagagagcctgatgctcttcatccaccccctggtgtggcagcac
cctttcgtgcccatcctctcacgccagatgctggacttcctcatggcgcccaccgcctac
ctcatgggctgtcatctgcaccactatgaagaggtggctgcggaggtagccgcggaaacg
gatgatctgatcctggttaatattgatgatgggaccgtgtcgtcttcctggtctgatggg
attgacctgcccgatgtcccgctggcggccgcagagtgttttataacacgggtggagggt
ctccaggtgcactatgacctggaggtgtgtcacctgggggacagtacagaggtgaatgcg
aggagggcccagaggaagcagtggcagagcaaactcaacacacacatccagaacatcact
ctggaactcatcgtcaacatcttcagagaagtccacgatcacctcaactatgagcacaga
gtcttcaacagtgaagagttccttaggtctagagagacagcagaccagccattttacaag
aaggtgttggacacacacatcttccactcattcctacgggatcgtctgaccaggaagatg
gacgcattcacacgtatggagctgagtactcggacagaagcttacaggctgaggtccatg
acagagtctccgcggcggcccaccatgcaggagttggcccgtaaatacaccagcccagag
agccggctcagcaagaggctgggggccagcctgcccaacctgggggagagtggggggtct
ctggtggggcccctcaggcagacctccttcaagaacatacaggtggacagcggtatgaag
tctccccagaggcccgtgagattcttcaagcttcctgagttcccccctccgctggcctac
cactacgtccagaattactaccaggagatgatcaccctcctgggcaaggccatcagcggg
gtggcctccggggactcctctctcctggctcgctatcactacctcaggggcttcgtgaac
accgtggctggtaaacgcctggatgctctagaagacttccagaacctctacaagacagac
acagacatctttcctggcgagctggtcaacgcgctggtggactctctacaggagggcgaa
caggcactggctgaccgccgacccgaaatcaaacacctgattagtcgggtaaagagggac
catgagagggagcgggagcgccatgtcgacgaaggtgtcaagcggttccaactcccgaaa
aagcacatgcagttggaggactttgtgaggcacgtgcaggagtctgggattgtcaaagac
caggggaccattcacaggctgtttgaggctctcactgtggaatgttgtaagagcagcttg
ggttggcatggtggtggtggtggctctgcggtgaaggcttcttcccagtctatcttttac
cttgattccaatctggagggccagcagaaacaagtggacccggagatattccgcgtgttc
tacaccttctggaaggagactgaggccgaggctcaggaagtggccctgccggcctcggcc
ctggagcacttggaggctaatgagtgtgtcttcaagctgtcctcttcggtcaagaccagc
cacggcgtgggcaagatcgccatgacacagagacggctgttcctgctgaccgaaggacga
cccgggtacatggaggtcaccaagttcagagacattgaggaggtgaagatctcctctgct
cccttcctactgctgaggatcccgtctttgaagatcaagaccaccctgaggaaggagaca
ttcgaggtcaacctgaagtcagaggttgacctctggcacctcatggtcaaggagatgtgg
gctggaaggaagatggccgacgaccacaaggacccccagtatatgcagcaggctctgacc
aacgccctgttgatggatgcagtggttggctgtctgcagtcacaaaaggccatttttgct
gcaaccaagctggcacactttgacagaatgaaactggaagtcccgctgatggtccctaaa
tccacgtcagagaccctgaaacacaagatcaacccttctctgggcctgactagcccccag
gcagtggatgttctgctttacaccccaggccagctgggtgtgtcgtctgactctgagggt
gatgggaaccccaaactgtggtgtgccctgagtgacgggaaggtggtggtgtttgatgca
gccagctggtccatgcagcagaaccaagtccaagtgggaacttcacgagtgaactgtatg
ctgggagtggaccggcagcaagtgtggattggctcccaggattcagtaatttacataatc
agcacccgcagcatgtcctgtaacaagcaactgacagaccaccgcagtgaggtcacaggg
ctgtccctaggggaatgcagcgagaaatacagccccaaggtggcatactcctgcagtgcg
gagggtgcagtgatagtgtgggacgtgtccacgttacaggtcaggaaacagttccgggtc
tcctgcgaccgtctccagtccgttcagctctgcaatggaaccctatggtgctgtgccaga
gactgcattatggaggtgtggaaaaacggaatgttacatcgcaagatctcccttcctgag
cagctctgtggctccccaactgccttcagcagccttctgctctaccatgagagggagcag
ctgtggacggcctgtatagacgtaggggagctgtgtgtgtggcacctcagggagcccacc
aagcctttccagaggatccagctgcctgactgtgcaggcgtcacctgccttatcaaggtc
aaaaaccagatctgggttgggggccgagggtggagttcggggaagtccagggggaagatc
tacgtagtggatgcccagcgacacacggtggagaaggagctggtagctcacacagactgt
gtccaggcactgtgctccgcagaggaccgctatgtgctgagtggggcagcccgcgaggac
gggaagatagccatctggaaagtggagtaa
DBGET
integrated database retrieval system
