Oncorhynchus nerka (sockeye salmon): 115131435
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Entry
115131435 CDS
T07952
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115131435 (thrb)
04081 Hormone signaling
115131435 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115131435 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115131435 (thrb)
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115131435 (thrb)
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
115131435 (thrb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ntox3
CpXC
Motif
Other DBs
NCBI-GeneID:
115131435
NCBI-ProteinID:
XP_029519018
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All DBs
Position
LG7:9447125..9572665
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AA seq
512 aa
AA seq
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MRPCKMPFVCAYLPSVQPLAIMNYCMPDMYEMPHGVGGGYPMQGGGEYCMYGGDGPGGYG
HCEPQPMHQIHPPCMEQAWPPSQPYACSYPGPNPVFKSEYCTMEVPLSHYNHQPDYYSEG
KPDFSHMQWMQEVNKKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKN
LNPTYACKYEAKCIIDKVTRNQCQECRFKKCITVGMATDLVLDDSKRLAKRKLIEENRER
RRKEELQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLSAVGVKETKPED
IGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCC
MEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGLSLSSFHLDDSE
VALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHYINYRKHKVAQFWPKLLMKVTDLR
MIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaggccatgcaaaatgccttttgtatgtgcctacctgccttcggtgcagccgctggcc
atcatgaactactgcatgcctgacatgtatgagatgcctcatggcgtgggcggtggctac
ccgatgcagggcggtggggagtactgcatgtatggaggtgatggtcccggggggtacggg
cactgtgagccccaacccatgcaccagatccaccctccctgcatggagcaggcttggccc
cccagccagccctacgcctgctcctacccaggacccaaccccgtgttcaaaagtgaatac
tgcaccatggaagtgcctctcagccactacaaccaccagcccgactactattctgagggg
aagcctgacttctcccacatgcagtggatgcaagaggttaacaagaaagggtacatccct
agttacctggacaaggacgagttatgtgtggtatgtggggacaaagctacaggatatcac
tatcgctgtatcacctgtgaaggatgcaagggtttcttccggcggacgatccagaagaac
ctgaacccaacgtacgcgtgtaagtacgaggcaaagtgcatcatcgataaggtgaccagg
aaccagtgccaggagtgtcgcttcaagaagtgcatcactgtcggcatggcaacagacttg
gtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggagaaccgtgagcgg
cggcggaaggaggagctccagaaaacggtgtgggaccggcctgagccgtcccaggaggag
tgggacctgatccgcatggtcaccgaggcccacatgtcaactaatgcccagggaaaccac
tggaaacagaaacgcaagttcttgagtgcagtgggggtgaaggaaaccaagcccgaggac
attggtcaagcgccggtcataaatgcacctgaagggagcaaagtggacattgaagccttc
agtcagtttacaaaaattatcacccccgccattaccagagtggtggactttgccaaaaag
ctgcctatgttctgtgagctgccttgtgaagaccagattatcctattgaaaggctgctgc
atggagatcatgtctttacgggcggccgttcgctacgaccccgagagtgagacgctgacg
cttaacggggagatggccgtgacccgcggccagctgaagaacggaggcctgggtgtggtg
tcggatgctatctttgatttgggcttatcgctgtcttcgttccacctggacgactctgag
gtcgctctgctacaggccgtcatcctcctgtcctccgaccgtccggggctgaccagcgtg
gagcgtattgagcgctgtcaggaggagttccttctggcctttgaacattacatcaactac
cgcaaacacaaggtggcgcaattctggcctaagctgctgatgaaggtgacggacctgcgg
atgatcggggcgtgccacgcctcccgtttcctgcatatgaaggtggagtgccccaacgaa
cttttccccccactcttcctggaggtctttgaggactga
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