Oncorhynchus nerka (sockeye salmon): 115131495
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Entry
115131495 CDS
T07952
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115131495
09144 Cellular community - eukaryotes
04530 Tight junction
115131495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115131495
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115131495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115131495
NCBI-ProteinID:
XP_029519119
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Position
LG7:complement(12773293..12809705)
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AA seq
441 aa
AA seq
DB search
MNRSFIKSQASLQYLDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLVMHVHRISNME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTTAMVTGAHGYADELES
DEESDIVIESSLKRPSRRSNTSVVSVASTSRSHTQAPPPAPVEHPSPPTQPLSVVSTASF
HSQPSLNGLSHMLHRDLNLQHPQYQPHTLQHHHSQHHNSNPALRESNGSLHKILSTMRTD
PRHSLALPRGGVEEDGTVITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagtttcattaaatcccaagcttccctgcaatacttggactgcatcgcggtt
gaagtgaaaagcaagtatggagcagagttccggcggttctccgtggaccgtttcaaaccg
gggaagttcgaggacttctataagctcgtcatgcacgttcaccgcatctccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaacgacgacaac
ttctgcaaggcggtgtctacggcccacccactgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctacgggacccactctctgacccggaagaagaaggctgtggtg
gcgctgaggaacgacgtcaacaggaagcgacctcacatccgcatcggaatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccggagtcccaccgccgcgtt
cgtctctaccgtcacggctccgacaaacccctggggttctacatccgggacgggaccagc
gtacgggtgacgccccatggcctggagaaggttcctgggatcttcatctcccgcatggtg
cctggcggcctggctgagagcacaggcctgctagctgttaacgacgaggtcctggaggtc
aacggcatcgaggttactgggaagacactggaccaggtgactgacatgatgatcgccaac
agccacaacctcattgtcacagtgaagccagtgaaccagcggaacaacgtggtgcgagcc
agccggatctccggcagctccggtcagtcatcagacagcagcggttccactggctacccc
agcctgtccaccacagccatggtgaccggtgcccacggctacgccgacgagctggagagc
gacgaggagtcagacatcgtcatcgagagcagcctgaagcggccgtcgcggcgctccaac
acatcagtggtgtctgtggcatcaacatcacgctcccacacccaagcccctcccccggca
cccgtggaacaccccagcccccctacccaacctctctctgtggtttccaccgcctccttc
cactcccagcccagcctcaatggcctctcccacatgctgcacagggacctgaacctccag
cacccccagtaccagccccacaccctccagcaccaccattcccagcaccacaacagcaac
ccagccctccgggagagcaacggcagcctgcacaaaatcctcagcaccatgaggacggac
cctcgacacagcctggccctgccccggggaggggtggaagaggacggcaccgtcatcacc
ctataa
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