Oncorhynchus nerka (sockeye salmon): 115131496
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Entry
115131496 CDS
T07952
Name
(RefSeq) protein Jumonji-like isoform X1
KO
K11478
protein Jumonji
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115131496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115131496
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115131496
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
115131496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
115131496
NCBI-ProteinID:
XP_029519121
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Position
LG7:12877156..12967871
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AA seq
1289 aa
AA seq
DB search
MSKERPKRNIIQKKYDDIDGIPWSEERDVRKVLYLSLKEFKTAQKRQLGDGTKYTNGSHA
RGQLNGLGQKGHKADGLRFQSTDGSSEYSEDGPAKKRPRLQAQRKFAQSQPNSPSTTPVK
VSDTALPAPSAHIRDISRRKPKTEDFLTFLCLRGYSSWPNEGLSALPSNMAYFGSSQDED
ELDDDEEEYEDVKPDISVASTSCQSTPRKGKPPGKHAVNGHVLNGHSKSPRDSHKPRGKE
WVQVRERSERAEARREQALSQPEATARGHTTNGLPHRRAAEEPRKQVFKVNGVTRISQPG
VHTAGAQKTKDFRLPSKTVKGQVTYTKAKRELVKKTKLNHRKHSTAASHRANSNNHHRHQ
RLPLSNSGKAQNSKAKTRKQVLLSNGVYKVANGGGVRLNGRLCAKQEVGRQGREGLRNSK
RRLEVAVAAIGAVADSQGQLVILENNPNPKKTKQLQTSPLETRSKKACQDKTLVPNGHIV
METTPPPTLLAPPPPPTPPATPPANPEPERQRPKRASAGKLMFIRQAQQRGQVASNPNHN
RSTTSESPCHTSGHNPGHIPHKPAEPRPDREWEREKERERERAERSRLSWAALGEAPVFC
PTQREFQDPLVYLDSVREGAEPCGLCRVVPPADWRPECKLNDEMRFVTQVQRIHKLGRRW
GPNVQRLACIKKHLKSQGITMEDPPLIGGCEVDLARFFQLINDMGGMQQVMDLKKWSKLA
DLLRIPKSAQDRLAKLQESYLQYLLSYDSLSPEEHQRLEREVLQEKEGLERLRGPLEGHT
ERNLALPRYEPKNGLAGSLVQRSNGQLCSRLKELDSQQLKVGRRRLFAQEKNNGDKTQQE
EEEADMEKGVLSDQHKCIYKGKSVSLTNFFRIARNTMTMCFNKEPGAAEVEQEYWRIVEQ
RHCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPW
LNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKVKLDKVVHTLLQANGTPGL
EMLEKNIMISPEVLCQEGIKVHRTIQQSGQFVVCFPGTFVSKVCCGYSVSETVHFATPQW
MNLGYEASKDLKCRHIAKPFSMEKLLYQIATAESKRENGHLLTTISALLKDLRNIEMRQR
QELYEAGLLSSARYGTHDNNLVPGDGRKKPRKWLALESSERRCQTCQHLCYLSMVVQENE
NVVFCLECALRYVENHKSCRGLKMMYRYDEEQINSLVKQVCGKALGKTTEKCNGASPFKP
PPKRGPRKRATVEVSLSRLSSHLSPAAVS
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcatccaaaagaaatacgatgacatagatggg
atcccctggtcagaggagagggatgtgaggaaggtgctctatctctccctgaaggagttc
aagactgctcagaaaaggcagcttggagatggaaccaaatacacaaatggttcccatgcc
cgcggccagctcaacggcttggggcagaagggccacaaggctgacgggttgcggttccag
agcaccgatggcagcagcgagtactctgaggatggtcctgccaagaagaggcccagactg
caagcgcagaggaagtttgcccagtctcagcccaactctcccagcaccacgccggtcaag
gtgtctgataccgccctgcccgccccctccgctcacatcagagacatctccagacggaaa
cccaagactgaggacttcctcaccttcctctgcctgagaggttactcctcctggccaaat
gaaggtttgtcagcgttgcccagtaacatggcgtactttgggagctctcaggatgaagat
gagctggatgacgatgaagaggaatacgaggatgtgaagccagacatcagcgtggcgtct
acttcctgtcagtccacgcccaggaagggcaaacccccagggaaacatgccgtcaacggc
cacgtgttgaatggccacagcaagtcgccccgggacagccacaagcccagagggaaggag
tgggtgcaggtgagggagcgcagtgagagggccgaggcccggagggagcaggccctcagc
cagccagaggccacagccaggggtcacactaccaatggactgcctcacaggagggctgca
gaggagccccgcaagcaggtctttaaagtgaacggcgtcacacggatctcccagccaggc
gtgcacacggccggtgcccaaaaaacgaaagacttcagactgccgtccaaaactgtgaag
ggccaagtcacatacaccaaagcaaaacgagaactggtcaagaaaaccaaactcaaccac
cgcaaacacagcactgctgcttcccatagagccaatagcaacaatcaccaccgccaccag
cgactccccctctccaactcaggaaaagcccagaatagcaaagcaaaaacacgcaaacag
gtgctattatccaatggggtgtacaaggtggctaatgggggcggtgtgcgcctcaacggt
cgcctctgtgccaagcaggaggtgggcaggcaggggcgtgaggggctgaggaactccaag
cggaggctggaggtggcggtagcagccatcggggcggtggctgactcccagggtcagctg
gtcatcctggagaataaccccaaccctaagaagacaaaacagctccagaccagccctctg
gaaacacgcagtaagaaagcatgtcaggacaagaccttggtccccaacggacacattgtc
atggaaaccacccctcccccgaccctgctagccccaccccctcccccgactcctcccgcc
acaccaccagccaatccagagccagagcgtcagcggcccaagcgggcgtcagccggcaag
ctgatgttcatcagacaagcacagcagcgggggcaggttgcctctaaccctaaccacaac
cgctcaactacctcagaatccccttgccacacttctggacacaaccctggacatatccct
cacaaaccagcagagccccggcctgacagggagtgggaaagggagaaggagagagagagg
gagagggcggagaggagcaggttgagctgggcggcgttgggtgaggcgccagtgttctgt
cccacccagcgggagttccaggaccccctggtgtacctggactctgtgcgggagggggcg
gagccctgcggactgtgtcgggtggttcccccggctgactggcgcccagagtgcaaactg
aacgatgagatgcgctttgtgacccaggtgcagcgcatccacaagctgggccgtcgctgg
ggccccaacgtacagaggctagcctgtatcaagaagcatctcaaatctcagggcatcacc
atggaagaccccccgctcatcggtggctgtgaggttgacctggctcggttcttccagctg
attaatgacatgggcggcatgcagcaggtgatggacctgaagaagtggagtaaactggct
gatctgctgcggatccccaagtcagcccaggaccgtctggccaagctgcaggagtcctac
ctccagtacctgctgtcgtatgactctctgtcccccgaggagcaccaacgcctggagagg
gaggtgctgcaggagaaggagggcttggaacgcctcagggggccactggagggccacaca
gagaggaacctggccctgccgcgctacgagcctaagaacgggctggccggcagtctcgtg
cagcgcagcaacggtcaactgtgcagccggctgaaggagctggacagtcagcagctgaag
gtgggacgccggaggctgttcgctcaggaaaagaataatggggacaagacacagcaggag
gaagaggaggcggatatggagaaaggtgttctcagtgaccagcacaagtgtatttacaag
gggaaatctgtatctctcaccaacttctttaggatagccaggaacaccatgaccatgtgc
tttaacaaagagcccggtgctgctgaggtcgagcaagaatactggaggatagtggagcag
aggcactgccatgtggcagtgcattatgggaaagtggacaccaacacacacggaagtggc
ttccctgtgggaaagtccgagccattttctaaacatggatggaatctcactgtcctccca
aataattctggatccattctgcggcatcttggagccgtgcccggggtgaccattccctgg
ctgaacattggcatggtcttttctacctcatgctggtctcgagaccagaaccgccttcca
tacattgattacttacacactggtgctgactgcatttggtattctgttcctgctgaagag
aaggtgaagcttgacaaggtggttcacacactgctgcaggccaacgggacccctgggctg
gagatgctggagaagaacatcatgatctctccggaggtgctttgtcaagagggtatcaag
gtccaccgcaccatccagcagagtggtcagtttgtggtctgcttccctgggacctttgtg
tccaaggtctgctgtggctatagtgtgtcggaaaccgttcactttgccaccccccagtgg
atgaacctgggatacgaggcttctaaggaccttaaatgccggcacatagccaaacccttc
tccatggagaagttactctaccagatcgccacggccgaatcgaaacgcgagaacggacac
cttctgacaacaatctccgctcttctcaaagacctcaggaacatagagatgagacaacgg
caggaactgtacgaggcggggcttctgtcttctgcccgctatggaacacacgacaacaac
ctggtgcccggcgacggacgcaagaaacccaggaagtggctggcgctagagtcctcagag
agacgctgccagacctgccaacacctctgctacctgtccatggtggtccaggagaatgag
aacgtggtcttctgtctggagtgtgctctgagatacgtggagaatcacaagtcctgcaga
ggcctcaagatgatgtatcgttatgatgaggagcagatcaacagcttggtgaagcaggtg
tgcggcaaggccctggggaagacgactgagaaatgtaatggtgcgagcccctttaaacca
ccacccaaacgcggtccccggaagagagccaccgtggaagtgtccctgtcccgcctctcc
tcccacctgtctcccgcagccgtctcctaa
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