Oncorhynchus nerka (sockeye salmon): 115131498
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Entry
115131498 CDS
T07952
Name
(RefSeq) synaptic vesicle glycoprotein 2A-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115131498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115131498
Transporters [BR:
one02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
115131498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
MFS_4
MFS_1_like
DUF3755
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
115131498
NCBI-ProteinID:
XP_029519125
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Position
LG7:complement(12988909..13007990)
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AA seq
733 aa
AA seq
DB search
MEDGYQNKTAFIKGAKDIAKEVKRQAAKKVGRGVDKMTDEYSKRSYARFEENDDDDYPVV
PGGQDGGYYRGDSQAANDEEGGHSDSTEGHDEDDEIYEGEYQGIPRADSSKAADGLAGGD
GQQFRDMAQFEGERRKDQEELAQQYETILQECGHGKFQWTLYFVLGLALMADGVEIFVVG
FVLPSAEKDMCLSEESKGMLGLIVYLGMMVGAFVWGGLADRIGRRQSLLICLSINSVFSF
FSSFVQGYSTFLLCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYA
SAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVAAIASLTTMPESPRFFLENGKH
DEGWMILKQVHDTNMRAKGHPEKVFSVTTIKTVKQMDELVDMGGDISTLRRYKLKLTSLF
HQVRSNFLAIFNPEYRRTTFMMMAVWFTMSFSYYGLTVWFPDMIKYIQKQEYASRTKFFT
KERVEHVTFNFTLENQVHRQGQYFNDKFMNLKMKSMVFEDSVFEECYFEDITSSRSFFRN
CTFIATLFYNTDLFQNRIINSKLVNSTFLHNKEGCLLDFTDDNNAYMIYFVSFLGTLAVL
PGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGSTESGMIALLCLFGGISIASWNAL
DVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFQSFVGITKAVPILFAAGALAAGSFL
ALKLPETRGQVLQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggctatcagaacaagacagcctttataaagggcgccaaagacattgccaaa
gaggtcaagcgccaggcggccaagaaagtgggccgcggtgtggacaagatgaccgacgag
tacagcaaacgctcctacgcccgctttgaggaaaacgacgacgacgactaccctgtagtg
cctggggggcaggacggtggttactaccggggcgacagccaggcagccaatgacgaggaa
ggtggccacagcgactccacagaaggtcacgacgaagacgacgagatctacgagggcgag
taccagggcattccccgcgctgactcgagcaaggctgctgacggcctagcagggggagat
gggcagcagttcagggacatggcacagtttgagggggaacggcggaaggaccaagaagag
ctagcccagcagtacgagaccatcctgcaggagtgtggccatgggaagttccagtggacc
ctctactttgtgctggggctggcgctcatggcagacggtgtggagattttcgtagtgggc
tttgtgctccccagcgccgagaaagatatgtgtctgtcagaggaaagcaagggcatgttg
ggtctgattgtttatctgggaatgatggtcggggcattcgtgtggggtgggctcgctgac
cggatcggccgacggcagtcccttctcatctgtctctccatcaacagtgtcttctccttc
ttctcctcctttgttcagggctacagcacctttctcttatgcagactactttctggtgtt
gggatcggtggttccatccccattgtgttctcctactactcagagtttctggcccaggag
aaacgtggggagcacctcagttggctctgcatgttctggatgattggtggcatctatgcc
tcagctatggcatgggccatcatcccacactatggctggagtttccagatgggctctgcg
taccagttccacagctggcgtgtgttcgtcctggtgtgtgcatttccctctgttgcggct
attgcttctctcaccaccatgccagaaagccctcgcttcttcttagagaacggcaaacac
gacgaaggctggatgattctgaaacaagttcacgacaccaacatgagagcaaagggacac
ccagagaaggtgttttctgtcaccaccatcaagactgtaaagcagatggatgagctggtg
gacatgggtggagacatatcaactttgcgacgctataaattgaagctgaccagcctattc
caccaggtgcggagtaacttcttggccatcttcaatccagagtacagaaggaccaccttc
atgatgatggctgtctggtttaccatgtcgttcagctactatgggctgacagtgtggttc
cctgacatgatcaagtacatccagaagcaggaatatgcctcgcgcaccaagttcttcacc
aaggagcgagtggagcatgtcacttttaacttcaccttggagaaccaggtgcaccgccaa
ggacagtacttcaatgacaagttcatgaaccttaagatgaagtccatggtgtttgaggac
tcagtgttcgaggagtgctacttcgaggacatcacctcgagcagaagcttcttcagaaac
tgcacctttatcgcaactctcttttacaatacagacttgttccagaacagaatcatcaac
agcaaacttgtaaacagcaccttcctacacaacaaggaaggctgtctgttggacttcact
gatgacaacaatgcctacatgatctactttgtcagtttcctgggcacattggccgtgttg
cccggcaacattgtgtcagccttgctgatggacaaaattggacgtctgaggatgttggcg
ggatcaagtgtcatatcttgtgtcagctgtttcttcctgtcattcggcagtaccgagtcg
ggaatgatcgccctcttatgtctcttcggcggcatcagcatagcttcctggaatgccctg
gatgtgttgactgtggaactgtacccctcggataaaaggacaactgcatttggcttctta
aatgccctttgcaagctggctgctgtcctcggcataagcatcttccagtccttcgtaggc
atcaccaaggctgtgcctatcttgttcgctgcgggcgcactcgcagccggcagtttcctg
gctctaaagctgcctgaaacacggggccaggttctgcagtag
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