Oncorhynchus nerka (sockeye salmon): 115131504
Help
Entry
115131504 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115131504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115131504
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115131504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
Pinin_SDK_N
PHDvar_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
115131504
NCBI-ProteinID:
XP_029519131
LinkDB
All DBs
Position
LG7:complement(13389992..13458646)
Genome browser
AA seq
1168 aa
AA seq
DB search
MLTTPSSYAHPPACLPSSSSIPPTPPYFPFPSPPCSPGPGVKGVGRAGGVTLRSPATRHL
THLDPWRRHSWEPGAIVTVQQKGMEPSDNRSVSLENLDPEEMEKVLGVALDVRRGGRDPR
RNPITQEGSLSSLTEEEAGSDVQHYSILEEQSNQLQGCSASAPTLSVARHRNLQSTAPRP
RSDCYETLPYCQLGGSTQSVDSDLGLLLWGREGSWTEVERDEAREERTGSPLERTFSFLR
KMAGNRKNKEKERMREREKEARDREARYSNGHLFTSLTVSGTTLCSACNKSITAKEALSC
PTCSVTIHNRCRDTLPNCAKMKQRQQKMALMRNNSALQNVTLRTKTPMMRERPSSAIYHS
DNLRQSLLGSRRGRSGLSLSKSVSTNNITGNLNDDSPLGLRRILSQSTDSLNFRNRAMSM
ESLNDEGEEYYTSMLEEMEIEGRDFEADSWSMAVDSGYLQTHRKDIIKRQDVIYELIQTE
LHHVRTLRIMERVFRQGMLEEVQLEPGVVHAIFPCLDRLTAIHARFLAQLLTRRNHSLQP
GSTYNFTIQQLGDVLLEQFSGQCADEMRKTYAEFCSRHLKAVKLYKELLARDKRFQYFIR
RVCRGHLLRRHGVQECILLVTQRITKYPVLIQRILDNTKDNEEEASCLAQSLTQIRELLT
SVDQQVMELERTQRLQEIRARLDPRAEAKVRDGGLFRGGELLRRRLIHEGMLLWKNPGSR
LKDVQVLLMTDILVFLQEKDQRFIFPCLEKSPVLSLQNLMIREIANQERGLFLISDSSPP
EMYEVHAASKDDKNTWIRLIQHTVRSCPSREEFPLIETEDKALLRRLKADIQQKDREVLE
LLQERVTLFSDLAEVTGGQEIMLPGGPNSRNLFRADMPQVPLGERLLTDAIAEVDRLSEL
LLGSTFAVPLPCSFNGHPNHTGALVINGQEVVLNGMHGCPAAKDWNGNQAGDRPSTEEVY
QRLVNLSAHLHALQGTVIKQDSILELCLRSDGPPVDAPTTPTGRVWRSLSRDAGMAEASM
GAAIGELALLQRQHSLLQEELGRLRGADGRLRDSEKARAQLERQVRDMKVHSTTVFDSVG
PAGSEQDPPLRKASETNADTKLASQGSIEHSEGHQESSDVEVTSDEEEEEEKEAKASPRS
ESPRDLQDIPEESEATAELPREPDVSHC
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaccccttcctcgtacgcccacccaccagcttgcctgccctcttcctcctcc
ataccacccacccccccttatttcccgttcccctccccgccatgctccccaggccctggg
gtgaagggggttggcagggccgggggggttaccctgcgctctccggccactcgtcacctc
acccacctggacccctggaggagacacagttgggagcccggagctatcgttacggtgcag
cagaaggggatggaacccagcgacaaccgcagtgtgagtctggagaacctggaccccgag
gagatggagaaggttctgggtgtggcgctggatgtccggcgaggggggagggatcctcgg
aggaaccccattacccaggagggctccctgtcctccctcacagaggaagaggccgggtct
gacgtgcagcactactccatattggaggagcagtcgaaccagctgcagggttgcagtgca
tcggccccgaccctcagtgtggcacgtcacagaaaccttcaaagcacggccccccgacca
cgctccgactgctacgagactttaccctactgtcaacttggaggatccacgcagagtgtg
gatagtgacctgggtctgctgctctgggggagagagggaagctggacagaggtagagaga
gacgaggcccgggaggagaggacaggcagccctttagagcgcacctttagtttcctacgc
aagatggccggcaaccgcaagaataaggagaaagaacgcatgagggagagggagaaagag
gcacgggacagggaggcgcgctacagcaatgggcacctcttcacctccctcaccgtgtcg
gggaccaccctctgttcagcatgcaacaagagcatcactgccaaggaggccctcagctgc
cccacttgtagtgtcaccatacacaaccgctgtcgagacacgttgcccaactgtgccaaa
atgaaacagaggcaacagaagatggctctcatgaggaataactcagctttgcagaacgtg
acccttcgtaccaaaacccccatgatgagggaacgccccagctcagccatctaccactct
gacaacctccgccaatccctgctgggctcgcgccgtggacgctccggtctttccctctcc
aagagcgtctccactaataacattacagggaacctgaatgatgactctcccttggggctg
cgcaggatcctgtcccagtccacagactcgctcaacttcaggaacagagccatgtccatg
gagtcactcaacgatgagggggaagagtactacacctccatgctggaggaaatggagatt
gaggggcgggattttgaggcggactcatggagcatggcggtggactcgggctacctgcag
acgcatcgcaaagacatcatcaagcggcaggacgtcatctatgagttgatccagacagag
ctgcaccatgtgcggacgctgcgcatcatggagagggtgttccgccagggcatgctggag
gaggtgcagcttgagccgggtgtggtgcacgccatcttcccctgcctcgaccgtctcacc
gccatacatgcccgcttcctggcacagctgctcacccggcgcaaccacagcctacagcct
ggcagcacctacaacttcactatccaacagctgggagatgtgctactggaacagttctcg
ggccagtgtgctgacgagatgaggaagacctacgctgagttctgcagccgccacctgaag
gctgtcaagctctacaaggagctgctggccagagacaagcggttccagtacttcatacgg
cgggtgtgtcggggtcacctgttgcgtcgccatggcgtccaggagtgcatcctgttggtc
actcagcgtatcaccaagtaccccgtactcatccagcgtatccttgacaacaccaaggac
aatgaggaggaggcctcctgtctggcccagtctctgactcagatcagggagctactcacc
tcagtggaccagcaggtgatggagcttgagcggacccagaggctgcaggagatccgggcc
aggctggaccctcgcgccgaggccaaggtgagggacggtggcctgttcagaggaggagag
ttgctccgcaggagactcatccatgagggaatgctgctctggaaaaaccctgggtccagg
ctcaaagatgtgcaggtcctgctgatgacagacatcctagtgttcctacaggagaaagac
cagaggttcatcttcccttgtctagaaaagtctccagtcctctccctgcagaacctcatg
attagggagatagccaatcaggagcgagggctcttcctcatcagtgactcctctcctccg
gagatgtatgaggtccatgctgcctcgaaagatgacaagaacacctggatacgcctcata
caacacactgtcaggagttgtccttccagggaagagttcccgctcatagagactgaagac
aaggcccttctgagacgactgaaagcggacatccagcagaaggaccgggaggtgctggag
ctgctccaggagcgagtcaccctgttctcagacctggccgaggtgacagggggccaggag
atcatgctgccggggggccccaactcccggaacctgttccgggctgacatgccccaggtg
ccactcggcgagagactgctcacggacgccatcgcagaggtggataggctgagtgaacta
ctgctgggctccacctttgcagtgcctctgccctgcagtttcaacggtcacccgaaccac
acgggagcactagtgatcaatggccaggaggtggttctcaatggaatgcacgggtgccca
gcagcaaaggactggaatgggaatcaggctggagataggccctcaaccgaggaagtgtat
cagaggctggtcaaccttagtgcccaccttcatgccctccagggcactgtgatcaagcag
gactccatcctggagctctgcctgcgctctgatggcccgccagttgatgccccgaccacg
cccaccggacgggtgtggcgctccctgtcacgtgacgcaggcatggccgaggccagcatg
ggggcggccattggggagctggccctgctccagaggcagcacagcctcctgcaggaggag
ctgggtaggctgcgaggggccgatggccgcctgagggatagcgaaaaagcccgagcccag
ctggagaggcaggtccgcgacatgaaggtccacagtaccaccgtgtttgacagtgtggga
cctgcaggctcagagcaggatccaccccttcgtaaagcaagtgaaaccaacgcggacacc
aaattggccagccaagggtcaatcgagcattcggaggggcatcaggaaagcagtgatgtg
gaggtgacgtcagatgaggaggaggaggaggagaaggaggccaaagcgtcaccgcgctcg
gagagtccccgagatcttcaggacattccagaggagagcgaagccacagcagaactacca
cgagagcctgacgtgtcacattgctaa
DBGET
integrated database retrieval system
