Oncorhynchus nerka (sockeye salmon): 115131582
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Entry
115131582 CDS
T07952
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115131582
Membrane trafficking [BR:
one04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115131582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP_N
Motif
Other DBs
NCBI-GeneID:
115131582
NCBI-ProteinID:
XP_029519255
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All DBs
Position
LG7:complement(16785824..16811406)
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AA seq
1378 aa
AA seq
DB search
MSGPALPPGVTFALLDFESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVFLL
TARVPAKIEQTFNYLDIQGIISNKPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGSCLHR
ICPGLSPAKAMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFRE
EVQWDVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSTKDYKLSTDVCE
QILRVVSRSSRLEELVLENAGLRSDFVQKLANALTCNPASALHTLNLTNNSLEDKGISAL
SAQLAKLPMGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDLSN
LYNFLGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRGKDVPHSF
KQFFGTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEG
CIAEIPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLV
HMIQEEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIQVDISGNGMGDMGAKMLAKALQ
INTKLRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLK
MEQYLLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVVQED
MKVAKNLMKDARNSKRLLPNLYHMRGSPGGMGSPIQDKLESMAGEIARVMDGQLQTLLQS
MVDTAEGLCPHVMKRSNLHQELMKAGAGRMTIPHSFITTTLLEQSGVDIINKISEVKLSM
ASFLSDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQEPNKMEVLEETVLQPETQEQSPH
HAERLEEMDTCVSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIYEEDPPPPAPSDKKP
TYFGELPTMEARKLEHHTKLRPKPKKRTKPSRAPREPICTSPPPEVEQNDLLGKVDEGVD
EFFYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKSHGTAAITT
PAAATVSTVTEEPLSPKALLWDHSEISPDHSRKPPTPEPTEEQPSESDSKGSPHGGRHFG
VPVMGPLMGMDLLAEMRKMHEKIVAHKSDSSDKADDKKGKPKGQTSSIAPRAKPTGVTPR
SPAPQSIKPHMGPHTLGPLSPRASSSHSPDDTPDSCLGNVSPKGPLPAPRLKREPSDYER
EEESSHINVELTGDSSPFDLDQEMDRSAIGGRQWSSLKRSTSVVQEVEGRERTKSLPASV
RPSSTVDLVHCQSPGVFAKDNTEEDFSPTPDTDQRQNLRPDNMEDTMTTSQCRKKSYI
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggccggccctgccaccaggtgtcacatttgccctacttgacttcgagagtctg
agagatgccgtgggaaggaagatcaagctcaccctgaagaagaggttgaaactggaggtc
aaaggtgacaaactggagaaccgagttctggctttggcatcccatcgggtctttctgctt
actgcaagggtccctgccaagattgaacagaccttcaattacctagatatacaggggatc
attagtaacaagcccactcagttgttgttggagtatgaccgaggccagctgtccctgaag
cttggctctgtggaggatgtggatgaggtggtggcccacattgggagctgtctacacaga
atctgtccaggcctctccccagcgaaggcgatgaagaagttgaccctgaagcctcctgag
aggacggccgccctacagtctctctgggaggaccaggccaccacagacctagggccgtgt
ggtggtttctcccacatgtactggtgtctctgtgaccagctgggtctgccattcagagag
gaggtgcagtgggatgtggacacaatctatcagacccaggacaccagggaactgaacctg
caggatttcgtacatcttgataaccgagatttggtggccatcattgtggtcctggagtat
aaccaatggttcaccaagctctccacaaaggactacaaactgtccacagatgtgtgtgaa
caaattctgcgagttgtgtcccgctccagtcgcttagaggagctggttttagagaatgca
ggtctcagaagtgattttgtgcagaagctagccaacgctctgacctgcaaccctgcctct
gcacttcacaccctcaacctcacaaacaactccctggaggacaagggcatatctgctctc
agtgcacagcttgccaaactcccaatgggtctcaagcatttgaacctttcaaagacctcc
atatcgcaaaaaggggttaacagtctggctcaggcgctgagtgccaaccctgctgtcccc
actaccctcacacacctggacctctgtgggaactcactccgaggagacgacctctcaaat
ctgtacaatttcctgggtcaacataacagtctagtaactctggatctgtccagcagtgac
tgctgtctggaccaagtctgcacttcacttctacgaggttctctcaagcacctctcagtg
ctcaacatgtcgaagagtgttttctctcacaggagaggtaaagatgtcccgcattccttc
aagcagttctttggcactgcactggcgctgagcagtgtcaacctgtctggaaccaagctc
cccctggaggcactcaaagcacttttactaggtcttggttgcaatcctaatctcagtgaa
gtatcactggatctcagcagctctgagttaagatctggaggctctcagattctggagggc
tgcatagctgagattcccaacatctccagcctggacatctcagacaacggtttagattca
gacctgaccactctcttggtgtggctggccaaaaatcgctccatccgccacctctcactg
ggcaagaacttcaataacatcaaatccaaaaatttgtctcaagtcttggacaacctggtg
cacatgatacaggaggaggaatcgcccctgacgtccctctccctggccgactccaagctg
aagggagatctgtccatcgtgctgaacgctctgggcagcaacaccagcctgatccaggtg
gacatcagtggcaacggcatgggagacatgggggccaagatgctggccaaggccctacag
atcaacaccaagctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctc
caggatgtggcagctgctttagaaaagaaccacaccattcgcttcatgcctatccccatc
atcgatgctgcccaggccctcaaagccagccctgagaaaacagaggacgccctactaaag
atggagcagtatctcctaaggaaccacgagactcgaaaatacctccaagagcaagcttac
cggcttcagcaaggcattgtcacgacaactacacaacagatgatggacatgatctgtgta
aaggtgcaggaccacctgaactccctgaggtatacagagaccgatgtcgtccaggaggac
atgaaggtggccaagaacctcatgaaggacgccaggaactccaaaagactgctgcccaac
ctgtaccacatgaggggatctcctggtggcatgggaagccccattcaggacaagctagag
tccatggccggagagatagccagggtcatggatggacagctacagacgttgttgcagtct
atggttgacaccgccgagggcctctgtccccatgtgatgaagaggagcaacctgcaccag
gagctgatgaaggcaggtgcaggcaggatgaccatcccccatagcttcatcaccaccaca
ctactggaacagtcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatg
gcttccttcctctcagaccgtatcgtggatgagatcttggaatctctgtcccgttcccaa
aacactctggcagaacacctgaccaggaaacctcaacctcttctccaccaggagcccaac
aagatggaggtgctggaggagacagtcctccaacctgagacccaggagcagagtcctcac
catgctgagaggctggaggagatggacacatgtgtgtccaagaggaagagcattctctgc
aggatgctgcggcctgtatctgtggcctttgaaatggagtttgacttggacaaggccctg
gaagaagtgcctatatatgaggaggatccgccccctcctgccccatcggacaagaagccg
acttactttggcgagctgcccactatggaggcccgaaagctagagcaccacaccaagctc
cgacccaaaccgaaaaagaggaccaaacctagccgagcaccacgggaaccaatctgcacc
tctccaccaccagaagtggagcagaatgacctcctggggaaagtggatgagggtgttgat
gaattcttctacaagaaaatcaccaaacttagttttaaacgacccaccctgaggggctcc
tccaacatccaggaggggtcggagaagaaacgggaatcccgtaaaagcggcttccttaac
ctcatcaagtctcgcacctcgaagtccgagaagagccatggaacagctgccatcaccacc
ccagctgctgcgactgtcagcactgtgacagaggagcccttgtcccccaaggctctgttg
tgggaccactctgaaatctcccctgaccactcacgaaagccgccaacccctgaacccact
gaggaacagccctccgagagtgacagtaagggtagtcctcatggtggccggcactttggg
gtccccgtaatgggccccctaatgggaatggacctcctggcggagatgagaaaaatgcat
gagaaaatagtcgctcataagtcggactcttcagacaaggcagatgataaaaaaggaaag
ccaaagggtcaaacatcgtcgatagcgcccagggctaaacccaccggtgttacacccaga
tccccagcaccccagagcatcaagccccacatgggaccacacactttgggacccctgagc
cctcgtgccagcagcagccacagcccagatgacacccctgactcctgtcttggaaacgta
tccccaaaaggaccactgcccgcccctcgcctgaagagagagccctcagactatgagagg
gaggaggagagtagccacattaatgttgaactcacaggagactccagcccatttgacttg
gaccaagagatggacaggtctgcaattggtgggagacagtggtcctccctgaagcgctcc
acttctgtggtacaggaagtagaaggtcgagaacgcaccaagtccctccctgcatctgtg
agaccttcatccacggtggaccttgtccactgccaaagccctggggtgtttgctaaagac
aacaccgaagaggacttctctcctacccctgacacggaccaaagacagaatctcaggcct
gacaacatggaggacaccatgacgacatcccagtgtagaaagaaaagctacatctag
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