KEGG   Oncorhynchus nerka (sockeye salmon): 115131662
Entry
115131662         CDS       T07952                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115131662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115131662
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115131662
 Complex B
    115131662
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 115131662
NCBI-ProteinID: XP_029519402
LinkDB
Position
LG7:complement(19028373..19046006)
AA seq 474 aa
MSDFDEFERLLTENKKERDKENRHGWRTPSRSLSRERKKRCRERRKSRESRGDSKERRRH
RRSIQNQKQSQETVVSRSPALHREKKKKVRKYWDVPAPGFEHITPLQYKAMQAAGQIPAT
ALLPTMITPEGLPHAPTSVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMCLGGL
TQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM
SESPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATAL
SKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNAALTGMNQTPVTLQVPG
LMPTSMASLGGLPTEVLCLMNMVAVEELLDDEEYEEIVEDVRDECGKYGQVKSIEIPRPV
DGLEVPGTGKIFVEFMTLFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtcggattttgatgaattcgagagattgttgactgaaaataagaaagagcgggacaag
gagaatcggcatgggtggcgtaccccgtcccgcagtctcagccgagagaggaagaagagg
tgccgggaaaggaggaagagcagggaaagccgtggcgacagcaaggaacgtcgtcgacac
aggcgcagcatacagaatcaaaaacaatcccaagagactgttgtgagtcgctctccagct
ctgcacagagagaagaagaagaaagtgaggaagtactgggatgtcccggcaccaggcttc
gagcatatcacccccctgcagtacaaggctatgcaggctgctggccagatcccagccacg
gccctgctgcccaccatgataactccagaggggctgccccacgcccccacctctgtaccc
gtggtgggcagccaaatgaccaggcaggccaggaggctctacgtaggcaacataccattt
ggcatcacagaggaagcaatgatggatttcttcaatgcccagatgtgccttggcggactc
acccaggcccctggcaaccctgttctagctgtacagataaaccaggacaagaactttgcc
ttcctcgagttccgctcggtggacgagacgacccaggccatggcctttgacggcatcatc
ttccagggtcagagcctgaagatcagacggcctcacgactaccagcccctgcccggcatg
agtgagagccccagtgtctatgtaccaggagtggtttcgaccgtggtgccagactcagcc
cacaaactcttcatcggtggcttgccaaattaccttaatgatgatcaggtaaaagagcta
ttgacctcctttggccctctgaaggccttcaacctggtcaaagacagcgccacggccctc
tccaagggctacgccttctgtgaatatgtggacgtcaatttgaacgaccaggcaattgca
gggttgaatgggatgcagctgggggacaagaagctcctggtgcagagagccagtgttggg
gccaagaacgcagctctgacgggtatgaaccagaccccggtgaccctccaggtgccaggc
ctgatgcccacctccatggcttcgctgggtggcctacccactgaggtcctctgcctgatg
aacatggtggctgtggaggagctgctggatgacgaggagtacgaggagatcgtggaggat
gtccgggatgagtgcggcaagtacggccaggtgaagagcattgaaatcccccggccagtg
gatggcctggaggtcccaggcactgggaagatctttgtggagttcatgacgctgtttgac
tcccagaaggccatgcaggcgctaacaggcaggaagtttgccaacagggtggtggtgacc
aagtactgtgacccagacgcttaccaccgccgagacttctggtag

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