Oncorhynchus nerka (sockeye salmon): 115131685
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Entry
115131685 CDS
T07952
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115131685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115131685
03016 Transfer RNA biogenesis [BR:
one03016
]
115131685
03012 Translation factors [BR:
one03012
]
115131685
04131 Membrane trafficking [BR:
one04131
]
115131685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115131685
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115131685
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115131685
Translation factors [BR:
one03012
]
Eukaryotic type
Elongation factors
115131685
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115131685
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115131685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
FcpA
Motif
Other DBs
NCBI-GeneID:
115131685
NCBI-ProteinID:
XP_029519456
LinkDB
All DBs
Position
LG7:complement(19693116..19697008)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacattgtggtcattggccatgtcgattccggaaag
tcaactaccacaggtcatctgatctacaaatgcggaggcattgacaagagaacaattgaa
aagttcgagaaggaagccgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccatcgacatttccctgtggaagttc
gagactgccaagtactacgtcacaatcattgatgcccctggacacagagactttatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctgattgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggcgtcaacaagatggactctactgagccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcagcacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaggtggaacgtaaggag
ggtggcgctagcggtgtgacccttctggaggctctggactctatcctggccccctcccgc
cccaccaacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctacccggtgacaatgttggcttcaacgtcaagaacgtatccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaatgaccccccaatggaggccggcaacttc
acagctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaagccctgaaatctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgttttgccgtacgcgacatgagacagaccgttgccgttggtgtcatcaaggcc
gttgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccaccaaa
gccaaatga
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