Oncorhynchus nerka (sockeye salmon): 115131686
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Entry
115131686 CDS
T07952
Name
(RefSeq) elongation factor 1-alpha, oocyte form-like
KO
K03231
elongation factor 1-alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115131686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115131686
03016 Transfer RNA biogenesis [BR:
one03016
]
115131686
03012 Translation factors [BR:
one03012
]
115131686
04131 Membrane trafficking [BR:
one04131
]
115131686
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115131686
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115131686
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115131686
Translation factors [BR:
one03012
]
Eukaryotic type
Elongation factors
115131686
Membrane trafficking [BR:
one04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115131686
Exosome [BR:
one04147
]
Exosomal proteins
Proteins found in most exosomes
115131686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
115131686
NCBI-ProteinID:
XP_029519457
LinkDB
All DBs
Position
LG7:complement(19697259..19700927)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVTTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMAWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacattaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggccatctgatctacaagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccattgacatttctctgtggaagttt
gagactggcaggtactacgtcacaatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggttgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaagcagctcattgttggcgtcaacaagatggactctactgagccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcaccacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggttggcatggggacaac
atgctggaagccagcgccaatatggcctggttcaagggatggaaggtcgaacgtaaggat
ggtaacgccaacggtgtgactcttctagaggccctggactcaatcctgcccccctcccgc
cccacagataagccccttcgtctgcccctccaggatgtctacaaaatcggtggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
tcggccatgcccggtgacaatgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaaaaacgaccccccaatggaggccggcaccttc
accgctcaggtcatcatcctgaaccaccctggccagatctcccagggctatgcccctgta
ctggattgccacactgctcacatcgcctgcaagttcagcgagctcaaggagaaaatcgac
cgtcgttccggcaagaagcttgaggatgcccccaagttcctgaagtctggagacgccgcc
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcct
cttggtcgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggcc
gtcgacaagaaggctgcctcaagcggcaaggtcaccaaatctgccgttaaggctggtaaa
aagtga
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