Oncorhynchus nerka (sockeye salmon): 115131688
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Entry
115131688 CDS
T07952
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115131688
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115131688
04261 Adrenergic signaling in cardiomyocytes
115131688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115131688
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115131688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
SepSecS
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115131688
NCBI-ProteinID:
XP_029519464
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Position
LG2:complement(52756534..52843653)
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AA seq
1429 aa
AA seq
DB search
MLMKMLWNWKILVSHVYCASFLLFWIILGTAVAEVKGSPQGIPLSVVKLWASAFGGEIKS
ISAKYSGSQLLQKKYKELEKSVRVEEIDGMKVVKNLSKKMEEMFRKKKEAIRRLVEAAEE
AHLQHEENPELQYEYFNAVLINEVDEEGNNVELGGEFFLEPNDHFNNLSVNLSLSVVQVP
TNMYNKDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHG
VIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNII
AYNQEIHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILSDFNQT
GHGSVCSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANK
GYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYMDSTGSIISRNKKGPSLMT
TVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHP
DLRPLYQKGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRL
LKMHNDYYYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLHDLEQPDVALADEWTYCN
TDEYYEHRSLSQIQAIKLYLTGRKPLIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSE
NSDKGVEIAYLGTRTGLSRTNLFVVQEDLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQV
PGTFVYSIPFGARPGSGRRCGPRRDACRFFRRGAPLASCRRRARRPSVRAALMTPAVVRG
TGGSPDWLAREAAGSASRRAGCLAARPSPAARSPLAPEGAPRPRSEPRFAAGAPATRVCR
LTSQPGSAVVDLLFPPGAPVPAGGAGGGGGGFRRAAPVAKGRFLGFSWEGGKDVRGNTGP
RGEKRGQGGGEAEGRRGKEKRAKGEETNEESRGGQGGRPGGLGERAAKGAGGGGGRGRRR
KGEAKAGGVSPARPDSGWRPEGTHGCRERHEPGKVKAGKGGLGRNGNGSEGRVKAQGTTG
QADPGSSSTGWAPTGTVDPEPAGTGGKRGTTRHSRDRSEEESERSDHPGPRRPRDERAGG
GQEGAQRHESPGRQRNGEGRKRKGDSRADGMIHHIDLIQCAALDGKCTISCDNEDIKCYL
IDNNGFILVTEDYSQTGEFFGEVEAAVMTKLLLIGSFKRINLYDYQALCREYAGSSDSGH
CLSHPFSIVKWLLTELVMFLLEFNLYSWWHVDLSVKGQYVCTMLVPCDTEYPAFVSERTI
KETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDNKCDCSSTLPVSMDPIEIMYNESLKCDR
LKFQKDRKRPESCHPFHPEENAMECGGAAGLSAPLTGALLSLLATLFTR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgaagatgctgtggaattggaagatcctcgtttcgcacgtgtactgcgccagc
ttccttctgttctggattatactgggcacggcagtggcggaagtgaaagggtccccgcaa
gggattcctctctcagtggtgaagttatgggcctcagcgtttggtggagaaattaaatca
atttctgcaaaatactctggatcccagctgctgcagaagaaatataaagaattggaaaag
tctgtccgagtggaagaaattgatggcatgaaagtggtcaaaaatctatcgaagaagatg
gaggagatgttccggaagaaaaaggaggccattcggaggctggtggaggcagcagaagag
gcacatctacagcacgaggaaaacccagagctgcagtatgagtacttcaacgcggtgctg
atcaacgaggtggatgaggagggcaacaacgtggagctgggaggagagtttttcctcgaa
cccaacgaccacttcaacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgccc
accaacatgtataacaaagatcctgccatagtgaatggggtgtactggtcagaggccttg
aataaagtgttcgtggataactttgaaaaagatccgtccctgatatggcagtactttggc
agtgccaagggcttctttaggcagtatcccggggtcaaatggcatccagacgaacacgga
gtcatcgcctttgactgcaggaacaggaaatggtacatccaggcagcgacatctcctaaa
gacgtggtgattctagtagatgtgagtggcagtatgaagggcctgagactgaccatcgcc
agacagacagtctcctctatactggacacactgggagacgacgacttcttcaacattatc
gcttacaatcaagagattcactatgtggagccttgtctgaatggtacactggtacgagca
gacagaaacaataaagctcattttagagaacatctggacaagctgtttgccaaagggatt
ggtctgctgggtgatgctctgaccgaagcattcaccattctaagtgattttaaccagact
gggcacggcagtgtgtgtagccaggccatcatgcttgtgactgacggggccacacagatg
tacgacgatgttttcgccaagttcaactggccagacagaaaggtgcgcatattcccttac
ctgattggccgagagtctgcctttgctgataacatgaaatggatggcctgtgctaataaa
gggtatttcagtcagatctccacactggctgatgtacaggaaaatgtgatgaggtatctt
catgttatgagtcgtcctaaagtcatcgatcatgaacatgacacggtctggacagaggcc
tacatggacagcactgggagtatcatatccagaaacaagaagggccccagcctgatgacc
actgtggccatgcctgtgttcagcaccaagaacgagacgaagaaccagggtattctccta
ggggtagtgggcacggacattcccctacaggaacttatgaagatcatccctaaacacctg
ctgggtatccacggttacgcgtttgccattactaacaacggctacatcctgacccatcca
gacctgaggccactgtaccagaagggccagaagaggaggaaacccaactacagcagtgtg
gacctgtccgaggtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaac
aggaagacggggactttctccatggaagtgaagaagacagtggacaaagggaaacgtctg
ctgaagatgcacaatgactactactacactgaggtcaagggaactcccttcagtgtcggt
gtggctttgtccagaggccatggcaaattcttcttcagaggaaatgtctccgtagaagca
gggcttcatgacctggaacagccagatgttgcgctggcagatgaatggacgtactgcaac
acagacgagtactatgagcaccgttctctctcccagatccaggctattaaactctacctg
accggacgcaaaccactcatcaaatgtgacagggagctgatccaggaggttctgtttgat
gctgtggtcacagccccactggaggcctactggacaggcctggccctcaacaagtcagag
aattcagataaaggtgtggagattgcttacctgggcacacgcactggcctctctagaacc
aacctgtttgttgtgcaagaggatctatccaatcaagacttcctgacagcggaggataag
gagggggtgtttaacgctgaccacttccctctgtggtataagagagcagcagagcaggtc
cctggcacctttgtctactccatcccctttggagcacggccgggctctggtcgtcgttgt
ggccctcggcgggacgcgtgtcggttttttcgccggggtgcccctctcgcttcttgccgc
cgccgggcccgtcgcccctcggtcagggctgcgttgatgacgccggcggttgtccgcggt
acgggcgggtctccggactggttggcgcgcgaggcggcgggctcggcgtcacgcagggcc
ggttgtttggcggcccggccgtccccagccgctagatcgcccctggcgcctgagggggcg
ccgcgcccgcggtccgagccccggttcgcggccggtgcgccggcgacccgcgtgtgtcgt
ttgacttcgcaacccggctcggctgtcgtcgaccttcttttcccccctggtgcgccagtc
cctgccggcggggcggggggggggggcggcggcttcaggcgggcggcgccggtggccaaa
ggcaggttcctcgggttctcgtgggagggcgggaaggacgtgaggggaaacacagggccg
cggggtgagaaaagggggcagggtgggggggaggcagaggggagaagaggcaaggaaaag
cgggccaagggtgaggaaacgaacgaggagagccggggggggcaagggggtaggccaggg
gggctgggggaaagggcggcgaagggtgcggggggcggcgggggccgggggcgccgcagg
aaaggagaagcaaaggcggggggggtgagcccagcacgcccagacagcggctggagaccg
gaaggcacccatgggtgcagggaaaggcacgagcccgggaaggtgaaggccgggaagggg
ggtctcggcagaaacgggaacgggtccgaggggcgagttaaagcccagggaacgacaggg
caagcggaccccgggagcagcagcacgggatgggctcccacgggaacagtggacccggaa
ccggcaggcaccgggggaaagagggggaccacaagacacagccgggacagatcagaagag
gagagcgaaagaagtgatcacccaggcccaagaaggccgcgcgacgagagggccgggggg
ggacaggagggggcgcaacgccacgagagtccggggaggcaaaggaatggggaagggcga
aagaggaagggggactcgcgagcagacggaatgattcatcatattgatttgatacagtgt
gctgctctggatgggaagtgcacaatcagctgtgataatgaggacatcaagtgttacctc
atagacaacaacggctttattctggtcacagaagactactctcagacaggggagttcttt
ggcgaggtggaggctgctgttatgaccaagctgctcctcattggctccttcaagaggatc
aatctgtatgactaccaggctctctgtagagagtatgccggcagcagtgacagtggacac
tgtttatcacatcccttctccattgtgaaatggctcctgactgaactagtaatgttcctg
ctggaattcaacctgtacagctggtggcatgttgacctctctgtcaaaggtcagtatgtg
tgtaccatgttggtgccatgtgatactgagtaccctgcctttgtctctgagcgtaccatc
aaagagaccacgggcaacattgactgtgagggctgtgtcagatcttttgttattcagcag
attcccagcagtaacctattcatggttgttgtggacaacaagtgtgactgtagctccacc
cttccagtttccatggaccccattgagattatgtacaacgaatctctgaaatgtgatagg
ctgaagtttcagaaggacaggaagcggccagaatcatgtcatcctttccaccctgaggag
aatgccatggagtgtggaggagcagcaggcctgtctgcccccctcacaggagcactgctc
tccctgctggccactctcttcaccagatga
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