Oncorhynchus nerka (sockeye salmon): 115131697
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Entry
115131697 CDS
T07952
Name
(RefSeq) protein argonaute-4 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115131697
03036 Chromosome and associated proteins [BR:
one03036
]
115131697
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115131697
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115131697
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115131697
microRNA pathway
RISC loading complex
115131697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoN
PAZ
ArgoL1
ArgoL2
DUF3284
Motif
Other DBs
NCBI-GeneID:
115131697
NCBI-ProteinID:
XP_029519486
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Position
LG7:19900467..19933437
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AA seq
888 aa
AA seq
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MEALGPDPPIGPSAPTSLFQPPRRPGMGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPE
KRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGK
DQTFKVSLQWVSVVSLQMLLEALSGHNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPP
EGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINE
QTKPLTDSQRVKFTKEIRGGWGPAGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLE
NGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPM
LQYGGRVSTDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQ
CREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMSYVGLQLIVVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQE
QLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKAC
ISLEEDYRPGITYIVVQKRHHTRLFCSDKAERVGKSGNVPAGTTVDSTITHPSEFDFYLC
SHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAF
RARYHLVDKDHDSAEGSHVSGQSNGRDPLALAKAVQIHYDTQHTMYFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcggacccgacccccctataggcccgtcggcccccacctccctcttccag
cccccgcggaggcctggcatgggcaccgtggggaagcccatccgcctgctggcaaaccac
ttccaggtgcagattcccaagattgatgtctatcattacgatatcgacatcaagcctgag
aaacggcctcggagggtcaaccgggaggtggtggacaccatggttcgtcacttcaagatg
cagatctttggtgatcgacaaccgggctacgatgggaagaggaacatgtacacggcccat
ccactacccatcgggagagacagggtggatctagaagtgactctaccgggggaggggaag
gaccagaccttcaaggtgtcgctgcagtgggtgtcggtggtgagcctgcagatgctcctg
gaggccctttcgggccacaatgaggtccccgaggactctgttcaggccctggacgtcatc
acccgccacctgccttccatgaggtacactccagtggggcgctccttcttctcccctccg
gagggctactaccacccactgggcggagggagggaggtatggttcggcttccatcagtcg
gtccgtcctgccatgtggaacatgatgctcaacatcgatgtctctgccaccgctttctac
cgtgcccagcctgtgatcgagttcatgtgcgaggtgctggacatccagaacatcaacgag
cagaccaagccactcaccgactcccaacgcgtcaagttcaccaaggagatccgaggtggg
tggggacctgcaggtctgaaagtcgaggtcacccactgtggtcagatgaagaggaaatat
cgcgtctgcaatgtcacacgccgtcctgccagccaccaaacgttccccttacagctggag
aatggccaggccatggagtgtacagtggctcagtacttcaagcagaagtacagcctacag
ctaaaatacccccacctgccctgtctacaagtggggcaggaacagaagcacacctaccta
cccctggaggtttgcaacattgtggccgggcagcgctgcatcaagaagctgacagataac
cagacctccaccatgatcaaagctacagcacgttctgcacccgacaggcaggaggagatc
agccgactggtcaaaagcaacagcatggtgggcggtcccgacccctacctgaaggagttt
ggcattgtggtgcacaacgacatgaccgaggtgacaggccgagtcctcccagcgcccatg
ctgcagtatgggggccgggtgagtaccgacactgggcgggactgtggcaggggactctct
ccgcagaataagaccgtggccacgcccaaccagggcgtgtgggacatgcgggggaagcag
ttctacgccgggatcgagatcaaggtgtgggctgtggcctgcttcgccccacagaaacag
tgcagagaggacctgctcaagagcttcacagaccagctgaggaagatctcgaaggacgcg
gggatgcccatccagggacagccgtgtttctgtaaatacgcccagggagcggacagcgtg
gaacccatgttcaaacacctgaagatgtcctatgtgggactgcagctcatcgtggtcatc
ctgcccggcaaaacccctgtctacgcggaggtgaagcgggtaggagacactctcctgggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacgtccccccaaaccctctcc
aacctctgcctcaagatcaacgccaaactgggtggcatcaacaacgtccttgtgccccat
cagagaccctctgtgttccagcaacctgtcatcttcctgggggcggacgttactcaccct
ccagccggcgacggcaagaagccctccatcgcggcggtggtgggcagcatggacggccac
cccagccgctactgtgccacggtgcgcgtgcagacgtcgcgccaggacctgtctcaggag
cagctgtacagccaggaggtcatccaggacctgaccaacatggtgcgcgagctgctcatc
cagttctacaagtccacacgcttcaagcccacccgcatcatctactaccgcggcggcgtg
tccgagggccaaatgaaacaggtggcgtggccggagctgatagcaatcaggaaggcctgt
atcagcttggaggaggactaccgaccgggcatcacctacatcgtggttcagaaacgccac
cacacccgcctcttctgctcagacaaggccgagagggttggaaagagtggcaacgtccca
gccggaaccactgtggacagcacaatcacccacccctcagagtttgacttctacctgtgc
agccatgctgggatccagggcaccagccggccctcccactaccacgtcctgtgggatgac
aactgcttcacggccgacgagctccagctgctcacctaccagctgtgccacacctacgtc
cgctgcacccgctcagtctccatccccgcgccagcctactacgcccggctggtggctttc
cgcgcccgctaccacctggtggacaaagatcacgacagtgcggagggcagccacgtgtcg
ggccagagtaacggtcgggaccccctggccctagccaaggcagtccagatccactatgat
acccagcacaccatgtacttcgcctga
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