Oncorhynchus nerka (sockeye salmon): 115131777
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Entry
115131777 CDS
T07952
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115131777
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115131777
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
Others
115131777
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115131777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
DarA_N
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
115131777
NCBI-ProteinID:
XP_029519617
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All DBs
Position
LG7:complement(23572056..23612923)
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AA seq
564 aa
AA seq
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MADVEGDEIKSALPSASRNGPAAGSVVGTGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGISDVELRIALPDKTIISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDNPLAVHYCFHQALDDVKKGFIKTEDNSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKRVEEEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattaagtcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtaccggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtatgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagtgtggagggggccacccacaagcaggtggtggatctg
atccgggccggggagagggaactggtgctttctgtgctgtctgtgccgccccaggaggca
gacggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatctccatccccacattcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaatgtgtacatgtcgggcaggcagctgtgctccaagcgctaccgggagttt
gctatcctgaaccagaacctgaagagggagtttgccagttacaccttccccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcatttcagacgtggagctgcggatagcc
ctgccagacaagaccatcatctctgtcagggtgcgcaaaaacagcacaactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacgtcagctgtgccgggcacctgtctggccctccgcaagtgg
cttttcacttctcaggaggaggaacttctcagggacaacccgctggctgtccactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaattcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaaactgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggagagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacgggttgaagaggaggcctctgacaaagacaaccagaactgcagt
aacaacgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa
DBGET
integrated database retrieval system