KEGG   Oncorhynchus nerka (sockeye salmon): 115131777
Entry
115131777         CDS       T07952                                 
Name
(RefSeq) sorting nexin-27-like
  KO
K17936  sorting nexin-27
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115131777
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:one04990]
    115131777
Membrane trafficking [BR:one04131]
 Protein recycling
  Others
   Others
    115131777
Domain-containing proteins not elsewhere classified [BR:one04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   115131777
SSDB
Motif
Pfam: PX PDZ PDZ_6 RA SNX17-27-31_F1_FERM RA_2 PDZ_2 SNX17_FERM_C USP7_C2 DarA_N SNX17-31_F2_FERM
Other DBs
NCBI-GeneID: 115131777
NCBI-ProteinID: XP_029519617
LinkDB
Position
LG7:complement(23572056..23612923)
AA seq 564 aa
MADVEGDEIKSALPSASRNGPAAGSVVGTGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGISDVELRIALPDKTIISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDNPLAVHYCFHQALDDVKKGFIKTEDNSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKRVEEEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcggatgttgaaggcgatgaaattaagtcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtaccggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtatgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagtgtggagggggccacccacaagcaggtggtggatctg
atccgggccggggagagggaactggtgctttctgtgctgtctgtgccgccccaggaggca
gacggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatctccatccccacattcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaatgtgtacatgtcgggcaggcagctgtgctccaagcgctaccgggagttt
gctatcctgaaccagaacctgaagagggagtttgccagttacaccttccccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcatttcagacgtggagctgcggatagcc
ctgccagacaagaccatcatctctgtcagggtgcgcaaaaacagcacaactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacgtcagctgtgccgggcacctgtctggccctccgcaagtgg
cttttcacttctcaggaggaggaacttctcagggacaacccgctggctgtccactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaattcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaaactgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggagagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacgggttgaagaggaggcctctgacaaagacaaccagaactgcagt
aacaacgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa

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