Oncorhynchus nerka (sockeye salmon): 115131822
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Entry
115131822 CDS
T07952
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04148
Efferocytosis
one04218
Cellular senescence
one04310
Wnt signaling pathway
one04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115131822
04310 Wnt signaling pathway
115131822
04020 Calcium signaling pathway
115131822
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115131822
09143 Cell growth and death
04218 Cellular senescence
115131822
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115131822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115131822
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
115131822
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
115131822
NCBI-ProteinID:
XP_029519693
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Position
LG7:25342243..25403996
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AA seq
863 aa
AA seq
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MKSAEEDAYSHTPNISLSLGKSCLPSQYHSLQSSPTISVSISQPLSYSAQNDMRTVGYYS
SPSIHPTEAPVLESPRIEITAYGQFPEEEVEESNNLPVPKQVNSIVTLTLPNADGYRDPS
CLSPASSVSSRSCHSEASSYESGFSYNYENSPQNSPWQSPCVSPKGSSSLALPGEACTHA
GSPHNSPSTSPLSSVMDDSWMGQRGSRPNSPCGGKRKYSLNGTTTSKSPYSPNHSPGPSP
HTSPRLSVTDESWMPNNTNQYTNSAIVAAINALTTDGVADLGEGIPLKARKTSLEPGAVC
LKVEPGREELSPGELCQDEYFSSRLPLKKENYCGGLLDVPSHPYSWSKPKQYVSPSLPAL
DWQLPSSSGPYRLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMETEPLILQ
LFIGTADDRLLRPHAFYQVHRITGKTVSTPSHETLQSNTKVLEIPLLPENNMRAIIDCSG
ILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQSTGRTLSLQTASNPMECSQRSAQEL
PLVDKQTLQTCPAAGGEKMLLSGHNFQHDSKVVFMEKAQDGHHLWETEAKVDKDSSKSTS
LRIEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQGFTYVPANVPMIKMEPHDDCDPPQVC
PKHCPGLALHPKPYYTPQVMTSMIPTELRPCMGGAYPACQQRLGGKPSSLSCSSSPSTSP
KLHDLSPTTPFSMCLSAGPSQSPIPHVSIIQETPGRYQPQSVLYPPSSASSSPGSQPSTP
GTSGPEAPFSPTHCLTPPQPISGSSSPVTEQLPKVPERGGRSSSPMLAINIKQEPQELDQ
MYLDDVNEIIRNDLSSISVHSLA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgctgaagaggatgcatacagccacacccccaacatcagtctctccctgggc
aaatcctgcctgccctcccagtaccacagtctccagtctagccccaccatctcagtgtcc
atcagccagcctctcagctacagtgcccagaacgacatgaggacagtgggttactactca
tcccctagcatccatccaaccgaggccccggtcctcgagagccctcgtattgagatcaca
gcctatgggcagtttcctgaggaggaggtggaagagagcaacaaccttcctgtacctaaa
caggtcaactccattgtgaccctgacgttgcccaacgcagatggctaccgtgaccccagc
tgcctcagcccggccagcagtgtgtcgtcacgcagctgtcactccgaggcctcgtcctac
gagtcgggcttctcctacaactacgaaaactcaccccagaactcaccctggcagtcgccc
tgcgtctcgcccaagggctcctcctctctcgccctgccgggtgaagcttgcacccatgcg
ggctccccacataactccccctctacctcccccctttctagtgtcatggatgacagctgg
atgggccagcggggctccaggcccaactccccttgtggtgggaagagaaaatacagctta
aacggaaccacaacctccaagtccccctactcccccaaccactcccctgggccttcccct
cacacctccccacgcctcagtgtcacagatgagtcctggatgcctaacaacactaaccag
tacaccaactcagccatagttgcagccatcaatgctctgaccacagacggtgtggcagac
ctgggtgagggcatccctctgaaggcccggaagaccagcctggagcctggggcagtgtgc
ctgaaggtcgagcctggacgagaggagctcagccctggggagctttgtcaggatgagtac
ttctcctcccgcctgcccttaaagaaggagaactactgtggggggttactggatgtgcca
tcgcacccatactcatggtccaagccaaagcaatatgtcagcccatctctgccagccctt
gactggcagctgccatccagctccggaccgtacaggttgcagatcgaggtgcagcccaaa
tctcaccaccgtgcccactacgagactgaagggagcagaggggcagtcaaggctctggca
ggaggacaccctgtggtgcagctccacggctacatggagaccgagcccctgatcttgcag
ctattcattggcacggcagacgatcgtctcttgcggccccatgccttctaccaggtccac
cgcatcactggcaagactgtctccacccccagccatgagaccctgcagtctaacaccaag
gtgctggagattccactactgcccgagaacaacatgcgcgccataattgactgctccggc
atcctgaaacttcgcaactcggacatcgagctgcggaagggcgagacagacatcgggcgt
aaaaacacacgtgtgaggatggtgttccgggttcacatcaaccagtccacaggaagaaca
ttgtccctgcagactgcatccaaccccatggagtgctcccagagatcagcccaggagttg
cccctagtggataagcagactctgcagacgtgccctgctgctgggggagagaagatgctc
ctcagcggacacaactttcagcacgactccaaagtggtgtttatggagaaagcccaagat
ggtcatcacctatgggagacagaggccaaggttgacaaggactcctccaaatctacatct
cttcgcattgaaatccctccttatcggaaccagaggatatccagtcctgttcaggtgaac
ttctatgtgtgcaatggcaagaggaaaaggagccagtaccagggattcacctatgtgcct
gccaatgttccaatgataaaaatggagccacatgatgactgcgacccccctcaggtgtgt
cccaagcattgccctggcctggcgctacaccccaagccctactacactccacaggtgatg
acctccatgatacccacagaactccggccgtgcatggggggtgcctaccccgcttgccaa
cagagactgggagggaagccttcctcactgtcctgctcatcctcccccagcaccagtccc
aaactgcatgacctgtcacccaccacgcccttctccatgtgcctgtcagcaggcccatcc
cagtctccgatcccacatgtctccattatccaggagactcctggacgctaccagccacaa
tctgttctctacccacccagtagtgcctcatcctccccaggttcgcagccctccacccct
ggcaccagcggcccagaagccccattctcccccacccactgcctgacgccgccccagccc
atcagtggcagctctagcccagtgaccgaacagttacccaaagtgccagagagaggcggc
cgctcgtcgagccccatgctggctatcaacatcaaacaggagccacaggaactggaccag
atgtacctagatgatgttaatgagatcatcaggaacgatctctcaagcatctccgtccac
agtcttgcgtaa
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