Oncorhynchus nerka (sockeye salmon): 115131829
Help
Entry
115131829 CDS
T07952
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115131829
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115131829
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115131829
Protein kinases [BR:
one01001
]
Serine/threonine kinases: Other
Other
115131829
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115131829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
WD40
Beta-prop_WDR19_1st
LisH
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
115131829
NCBI-ProteinID:
XP_029519701
LinkDB
All DBs
Position
LG7:complement(26208276..26237396)
Genome browser
AA seq
1538 aa
AA seq
DB search
MASASASVDSKAELTSLLEQWEREQQASTPDLVNILTKISELVERETEEYHKADPDPFDD
RHPGRADPECVLGQLLKILFKNDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVVVPLMLQRL
RELQAKDTENRKGFKRPSPRKCLGEPLLPLDEETVDGGFEDNPFPPGNEGIERNEKGSDE
DRVEIHSHESYSEISFHLNYLNHTHKTSSCANSAVKGLMKPVSAPPPLSHRDFPDCREEG
STHLKRRTERENGRKVKQKLNFSLPDPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEM
EQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQLTFEALKYLASLLLHK
KFAAQFVVHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVSYS
LWLLECSHASGCCHATMFFSISFSFRAVLELFDRQDGLRRIVNLISTLEILNPEDQGALL
SDDQIFSSRQTAKHTCMALRRYSEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKACSYTH
EQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALD
ILSILTVVPKTQLLMSESVAVLDGEGGNAISTVGMGVVLVVAEGEVFVNDAEIQKSALQV
VINCVCAPDKRMSGIGKFISGTPLRRLPQTTKNSESVLTKMWNVVQSNNGIKVLLSLLTV
KMPITDADQIRTLACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVK
FCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEKELLLLIRNHLVVKGLH
DTATTLTKEADLPMAILPHPSSSALLPVVVPPASPAPALPRTPRLANGVTARLVSHSSHP
SVLLSVHPQPRPSTSQLLMVPPAAPPLLTPHQSNGSPLIGRIVFMRERPSPCPVPAICKK
PRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCKNPVTTCPPFSL
FTPHQCPEPKQRRQAPTNFTSRHTRRVVYPKYGGVDGGCFDRHLIFSRFRPISVFREADE
DESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLL
TSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKT
LTLHYPDLSNNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGL
ELIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADNEDDLLEMQMKTPFG
SSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRL
AEEEEDEEDQEDDDQEDDDDDEDDSDDDIDTDPLVAELENENGGEDEEDGNNEFSPSDDE
EVARLLEGDDDDDSDGDLALDNTDSSDLEDDIILSLNE
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgctagtgtggattccaaggcagagctgacctctctgctggagcag
tgggagagggagcagcaggccagcacaccggacctggtcaacatcctgactaagatttca
gagctggtggagagggagactgaggaatatcacaaagctgatccggatccttttgatgac
aggcaccctgggagagcggatccggaatgcgtcttgggtcagctgctaaagatcctgttc
aaaaatgatgacttcatgaatgctctcgttaatagctatgtgatgaccagtagagagctc
accctcaacactgcagcttgtcgcctgctgcagaatatcatgcctgggttggagactgct
gtggtctttcaggagaaggagggcatagtggagaggctttttaaatgggcccaggaggcg
gagcagcccctgagaatctatgctacaggcctgttggctggagcaatggagaaccaggac
atcgctgccaactacagggaggagaactctgtcgtggtgcctctgatgctgcagcggcta
cgcgagttgcaggccaaggacactgaaaaccggaaggggtttaaacggcccagtcccagg
aagtgcctaggggaacctctccttcctctggatgaggagacggtcgacgggggcttcgag
gacaaccctttccccccggggaatgaaggcattgagaggaatgagaagggatccgatgag
gaccgagtggagatccacagccacgagtcttacagcgagatctccttccacctcaactac
cttaaccacacccacaagaccagtagctgcgctaactccgctgtcaaaggactgatgaag
cctgtgtctgccccgccgcctctgtcccaccgggacttccccgactgcagggaggagggc
agcactcacctcaagaggagaacagagagggagaatggacggaaggtgaaacagaaactg
aacttctccctgccagacccggagaggaacttcagcgagctgtccaacagcagctggtct
gagatgagcccctgggtgattgggaacaactatcacctttaccctctgaccccagagatg
gagcagaggctcatcctacagtacctcacccctctgggagagtaccaggagcttctggct
gtcttcatgcagatgggagcctgtgagctgctcatccattacatggacctgaagcagacc
aatgatgtacagctcacctttgaggctctcaagtatctagcctccctgctcctgcataag
aagtttgccgcccagtttgtggtccatggaggggttcagaagctgttggagatccccaag
ccttccatggccgccacaggggtgtctctgtgcctctactacctggcctacaaccaggat
gccatggagagggtgtgtatgctgccccactctatcctgtctgacgtggtgagctacagt
ctgtggctgttggaatgttcccatgcctcgggctgctgccacgccaccatgttcttctcc
atctctttctcctttagagcagtgctggaactcttcgacaggcaggacggcctccggcgc
atagtcaacctgatcagcacattggagatcctgaaccctgaggaccagggtgccctgctg
agtgatgaccagatcttctccagcaggcagacggccaagcacacctgcatggccctgcgc
aggtactccgaggcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcgg
actgaaggaggtgctcccattcacccacagccttactacaaggcatgtagttacacccac
gagcaggtggtggagatgatggagttcctgattgagtacggcccagtcaggctgtactgg
gagcctgcagaagttttccataagctctcctgtgtgcagcttctcctgcagctcatctcc
attgcctgtgactggaggacctactacggcaggagtgacacagtgcgttatgccctggac
atactgagcatcctgacggtggtccctaagacccagctgctgatgtcggagtctgtggcc
gtgctggatggggaggggggcaacgccatctccaccgtgggtatgggtgtagtcctggtg
gtggcagagggagaggtgtttgtgaacgatgccgagattcagaagtctgctctgcaggtg
gtcatcaactgtgtgtgcgctccagataaacgcatgtccggcatcggcaagttcatctct
ggcacgcccctcagacgtctaccccagaccaccaagaacagcgagagcgtgctcaccaag
atgtggaatgtggtgcagtccaacaacggcatcaaggtactgctgtccctgctgacggtg
aagatgcccatcacagatgcggatcagattcggacgctggcctgtaaggccctggtgggt
ctgtcccgctccagctcagtcagacagattatcagcaagctgcctctcttcagcagtgga
cacatccagcagctcatgaaggagcccgtgctccaggacaaacgcagcgaacacgtcaag
ttctgcaagtttgcggcagagctaatcaagcgggtgtctggtaaacccctcatgatcggg
acggatgtctccctggcctggctgcagagggcaaacgtggtggcccagtccagaatatcc
tttcctgagaaggagctactgctgttgatccggaaccacctggtggtcaagggtctgcat
gacactgccaccacactcaccaaggaggccgacctccccatggccatcctcccccaccca
tcttcctcagctttgcttcctgtcgttgttccccctgcttctcctgcccctgccctcccc
cggacccctcggctggccaatggggtcacagcacggttggtgagccacagctctcatccg
tccgtgctgttgtcagttcacccccagcctcgtccctcgacgtcgcaactcctcatggta
cctccggccgcccctcccctgttgacccctcaccaaagcaacggctctcccctgattggg
cggatcgtgttcatgcgagagcgcccgtcgccgtgccccgtgcctgccatctgtaagaag
ccgcgggtgctgaggcagaagtcagactacggtgccttcagccagagtccagccatgaag
aaacagctggacagacacctgccctctccccctgccctggacagcatcatcacagagtac
ctgagggagcagcacgcgcgctgcaagaaccccgttaccacctgcccccccttctccctc
ttcaccccccaccagtgccctgagcccaagcagaggcgccaggccccaaccaacttcacc
tcccgacacacacgcagggttgtctacccaaaatacggaggggtggatggcggctgcttc
gaccgacacctcatctttagcaggttccgacccatctctgtgttcagggaagcagacgag
gatgagagtgggttcatgtgttgtgccttctctgcccgtgagcggttcttgatgctgggg
acatgtacgggccagctcaaactctacaatgtgttcacaggccaggaggaggccagctat
agctgccacagctctgccatcacacacctagagccatcacgggatggctctctgttgttg
acgtcagcctcatggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatc
atgaagcattccttcttagatgaccattatgtggagttcagtaaactttcacaagaccga
gtcattggcacaaaggaacacatagctcacatctacgacatccagacagggcagaagacc
ctcaccctccactacccggacctgtccaacaactacaagaggaactgtgcaacctttaac
cccaccgacgacctggtgctgaacgacggcgtgctgtgggatgtgcgctcagctcaggcc
atccacaagtttgacaagttcaacatgaacatcagcggagtgttccaccccaacggcctg
gagcttattgtcaacactgagatttgggacctgcggaccttccacctgctccacacagtg
ccagctctggaccagtgcaggatcgtcttcaacaacaacggcacggtcatctacggagcg
atgctacaggcagataatgaggacgatctattggaaatgcagatgaagactccctttggc
tcctccttcaggacgttcaacgccactgactacaaacccattgccaccatcgacgtgaag
aggaatatatttgacctctgcacggatactaaggactgctacctggctgtgatcgagaac
caagactcggtcaacacagacacggtgtgcagactgtacgaggtgggacgccagagactg
gctgaggaggaggaggatgaggaagatcaggaggatgatgatcaagaggatgacgatgat
gatgaagatgactctgacgacgacatcgacacagacccactggttgccgagctggaaaat
gaaaatggaggagaggacgaggaagatgggaacaatgaattctctccctctgacgatgaa
gaggtagctcgtctgcttgagggggatgatgacgatgactcggatggggaccttgccctg
gataacacagacagctcagaccttgaggatgacataatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
