Oncorhynchus nerka (sockeye salmon): 115131884
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Entry
115131884 CDS
T07952
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115131884
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115131884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115131884
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115131884
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115131884
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
115131884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115131884
NCBI-ProteinID:
XP_029519812
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Position
LG7:complement(29049230..29054885)
Genome browser
AA seq
614 aa
AA seq
DB search
MDNKMNSFDMETLSTLDYPYLPSLEYSHNSPHHHSPDRSHSFNHSPDRSHSFNHSPDRSH
SFNHSPDRSHSCNHRSDRSHSFNHRSDRSHSFNHSPDRSHSFNHSPDGSHSFNHSPDRSH
SFNHSPDRSHSFNHSPDRSHSFNHSPDRSHSCNHRSDRSHSFNHSPDRSHSFNHSPDRSH
SFNHSPDRSQSFNHSPDRSLSCNHSPHRNHSINHSPDRSHSYNYTYSVYQHASSPLNIDC
RVCGDTASGFHYGVHACEGCKGFFRRTVRLKLVYDLCELHCRIHKKSRNKCQYCRFQKCL
LVGMSHDAIRFGRMPQVEREKLQAEFIDVDARNPESADLRALSRLLCLSYHRHFPLTKSK
AKAILSGKTHGNSPFVIHDMKSLTAGQYFINCRQLPVLERQRSVLPPEEPAGELELSVFR
RIQIRSAEAVQEVTEFAKSIPGFTELDMNDQVILLKYGVIEVMTTMLAPLMNKDGTLFAY
GQIFMTREFLKSLRKPFCEMMEPKFEFAVKFNVLELDDSDMALFFAVIILSGDRPGLVNV
KPIEGLQETVLQALELQLKTIHPDCPQLFAKLLQKMTDLRQLVANHVRLIHLLKKQELEV
CLHPLLQEIMRDLY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaagatgaatagttttgacatggagaccctgtcgacgctggactacccttat
ctcccttctctagagtacagccacaacagtccccaccaccacagcccagacagaagccac
tcattcaaccacagcccagacagaagtcactcattcaaccacagcccagacagaagccac
tcattcaaccacagcccagacagaagccactcatgtaaccacaggtcagacagaagccac
tcatttaaccacaggtcagacagaagccactcattcaaccacagcccagacagaagccac
tcattcaaccacagcccagacggaagccactcattcaaccacagcccagacagaagccac
tcatttaaccacagcccagacagaagccactcatttaaccacagcccagacagaagccac
tcattcaaccacagcccagacagaagccactcatgtaaccacaggtcagacagaagccac
tcatttaaccacagcccagacagaagccactcatttaaccacagcccagacagaagccac
tcatttaaccacagcccagacagaagccaatcatttaaccacagcccagacagaagcctc
tcatgtaaccacagcccacacagaaaccactcaatcaaccacagcccagacagaagccac
tcatacaactacacatacagcgtgtatcaacacgccagctctccgctcaatattgactgt
agagtgtgtggggacacggcctcaggcttccactatggcgtccatgcctgtgagggctgc
aaggggttcttccgcagaaccgtgcggttaaaactggtgtatgacctctgtgagctgcac
tgtcggattcacaaaaagagccggaataagtgccagtactgtcgctttcagaaatgtctg
cttgtgggcatgtcacacgatgccatccgcttcggccggatgccccaggtggagagagag
aagctgcaggctgagtttatagatgtggacgccaggaacccagagtcagcggacctgaga
gccctgtccagactgctgtgcttgtcctaccacagacactttcccctgaccaagagcaag
gccaaggccatcctctctggaaagacccacggaaactcaccctttgtcatccatgacatg
aagtctctgacggcgggtcagtactttataaactgtagacagctcccagtactggagcgc
cagaggtccgtcctgccccctgaggagcctgctggggagctggagctctccgtcttccgc
cgcatccagatccgctccgccgaggccgtacaagaggtcacagagttcgccaagagcatc
cctgggttcacggagctggacatgaacgaccaggtgatcctgctgaagtacggggtcatc
gaggtcatgacgaccatgctggcgccgctcatgaacaaggacggcacactgtttgcctat
ggacagatcttcatgacccgggagttcctcaagagcctgaggaagcccttctgtgagatg
atggagcccaagtttgagtttgcggtaaagttcaacgtgctggagctggacgatagtgat
atggcgctcttcttcgccgtcatcatcctcagtggagaccgtccaggcctggtgaacgtg
aagcccattgagggcctccaggagacagtgctgcaggccctggagctgcagttgaagacc
atccacccagactgcccccagctgttcgccaagctactgcagaagatgaccgacctgcgg
cagctggtggccaaccacgtccgcctcatccacctgctcaagaagcaggagctggaggtg
tgtctgcatcccctactgcaggagatcatgagagacctgtactaa
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