Oncorhynchus nerka (sockeye salmon): 115131893
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Entry
115131893 CDS
T07952
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115131893
04519 Cadherin signaling
115131893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115131893
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115131893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
DUF2304
Motif
Other DBs
NCBI-GeneID:
115131893
NCBI-ProteinID:
XP_029519826
LinkDB
All DBs
Position
LG7:complement(29640288..29995224)
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AA seq
936 aa
AA seq
DB search
MKTALVLLLTSALQQAAFWGTNGDLVSKAPCRPGFSQSSYSVLISRDVLQSQSIIKDTTV
SSRKVKFDDCMENEGVVFQSGDARFSVGTDGSIYTQREVAGLSGPVQFTVTASGPHTHVW
ETTVKLALMGQPTPSPPGNQIRVEQGKEGERKEEEEVKASPEFQAPPTVIMFPRQRETSS
KVLRRQKRDWVIPPINVPENSRGPFPQMLVSIRSDQDRNISIRYSITGVGADQPPNEVFS
IDPVAGKMFVTKPLDRERRSSYHLRAHAVNMNGERVESPIDLYIYVIDMNDNRPEFKNQV
YNGSVDEGSKPGTFVMHLAAFDNDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIV
TVAAGLDREKVSQYSIIVQATDMEGNLNFGLSNTATAIISVTDINDNPPELTSRTFSGEV
PENRVNVVVANLTVIDRDQPHSPNWNAVYRIISGDPIGHFTIITDQHTNDGMVTVVKPVD
FEQNRAFMLTVVVNNQAPLASGIQSSLQSTSGVTISVVDINEPPYFPTNPKSIRFEEGVP
AGTSLTTFSASDPDRFMQQSIRYSKLADPADWLSINNTNGQIITTATLDRESIYVKNNIY
EATFLAVDNGSPMASGTGTLQIYLIDVNDNAPSLLPRESQICERINRNAGINITAADTDT
DPNVGPFVFELPTFPASIRRNWTVSRLNGDYARLSLRTQYLEPGVYEVPVIVTDSGNPPL
SNRSIIKVKVCPCDENGDCTLVGAVAAAGLGTGAIIAILICIIILLSMVLVFVLWMKRRE
KERQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVD
ERPIIPESQYPIRPVVPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTVGSV
SSLNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgctctcgttctcttgctgacatcagccttacaacaagccgcgttttggggg
actaatggagacctcgtgtccaaagccccctgcagacccggcttctcgcaaagttcctac
tctgtgctcatttcaagggatgtactgcaaagccagagcataattaaagataccaccgtg
tcatcgcggaaagtgaagtttgatgactgtatggagaacgagggggtggtctttcagagc
ggtgacgccaggttcagcgttgggaccgatgggtccatctacacccagagagaggtggca
ggcctgagcggaccggtccagttcacggtcactgccagcggtccacacacacacgtgtgg
gagacaacggtcaaactggccctgatggggcaacccacaccctcaccgccgggcaatcag
atcagagtggaacaggggaaagaaggggagaggaaggaggaagaggaggtcaaagcatca
ccagagtttcaggccccacccaccgtcatcatgtttcccaggcaacgggagacgagctcc
aaggtactgcggagacagaagagagactgggtcattccgccaatcaacgtgcctgaaaac
tccagagggcccttcccacagatgctcgtcagcatccgttcggaccaggaccgtaacatc
tccatccggtacagcatcacgggggtgggagcggaccagccacccaatgaggtgttcagt
atcgaccctgtcgccgggaagatgttcgtcaccaaacccctggaccgagagaggagatcg
tcgtaccatcttcgtgcccatgcagtgaacatgaatggtgagcgggtggagagccccata
gacctgtacatctatgtcatagatatgaacgacaaccggcctgaattcaagaaccaggtc
tacaacggctctgtggatgagggctccaagccaggtacatttgtgatgcacctggcagcc
ttcgataatgacgacaacaccacggccaatgggatggtgcgctaccggatcctgtcccag
acgccacacagccccatccccaacatgttcaccatcaacagcgagactggagacatcgtc
accgtggcagcaggcctcgaccgcgagaaagtgtcccagtacagcatcatagtccaggcc
acggacatggagggcaacctaaactttggcctgtctaacacggccaccgccatcatctct
gtcacagacatcaacgacaacccgccggagctcacctccagaaccttttcaggggaggtc
ccagagaaccgggtcaatgttgtggttgccaacctgaccgtgattgaccgggaccagcca
cactcgcccaactggaatgccgtgtacaggatcatcagcggagacccgataggtcacttc
accatcatcaccgaccaacacaccaacgacggcatggttaccgtagtgaagccggtggac
tttgagcagaacagagccttcatgctgacggtggtggtcaacaaccaggccccgctggca
agtgggatccagtcgtccctccagtccacatctggggtcaccatctctgtggtagacatc
aacgaaccgccctacttccctactaaccccaagtccatccgctttgaggagggcgtcccc
gctggcacctctctcaccacattctcagccagcgaccctgaccgcttcatgcagcagagc
atcaggtattctaaactggccgacccagctgactggctgtccatcaacaacaccaacggt
cagatcatcaccacggcaaccctggacagagagtccatctacgtcaaaaacaacatttat
gaagccaccttcctcgcggttgacaatggctctcccatggccagtggtacagggaccctg
cagatctatctgatagatgtgaatgacaacgctccgtctctgctgccccgcgagtctcag
atttgtgagcgcatcaaccgtaacgccggcatcaacatcacggctgcagacacagacacg
gaccccaacgtaggccctttcgtcttcgagctgcccacgttccctgctagcatacgacgc
aactggacagtgtcacgtctcaacggtgactatgcccggttgagtttacggacccagtat
ctggagccgggggtgtatgaggtgcctgtgattgtgaccgattcggggaaccctcccctc
tccaacaggtccattatcaaggtcaaggtgtgtccatgtgatgagaacggagactgcacc
cttgtcggggctgtggctgccgctggacttggtactggagccatcatagccattctcatc
tgtatcatcatactgctcagtatggtgctagtgtttgtattgtggatgaagcgcagagag
aaggagagacagaccaaacagctgctgattgacccggaggacgatgtcagagataacatc
ctgaaatacgatgaggagggagggggagaggaggaccaggactatgacctgagtcagctg
cagcagcctgactccttggagcacatcatcagtaagcccccgggggtacggagggtggac
gagcgccccatcatccctgagtcccagtaccccattcgaccggtggtcccccaccctggg
gacatcggggacttcatcaatgagggtctgcgggcggcagacaatgaccccacggcccct
ccctatgactccctcctggtgtttgactacgagggcagcggctctacggtcggctccgtc
agctccctcaactcctccagcacaggggaccaggactacgactacctcaacgactggggc
ccccgcttcaagaagctagccgacatgtacgggggaggggacgacgaatag
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