Oncorhynchus nerka (sockeye salmon): 115131908
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Entry
115131908 CDS
T07952
Name
(RefSeq) bromodomain adjacent to zinc finger domain protein 2A-like isoform X1
KO
K15224
bromodomain adjacent to zinc finger domain protein 2A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115131908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115131908
03036 Chromosome and associated proteins [BR:
one03036
]
115131908
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
115131908
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
NORC complex
115131908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Bromodomain
WSD
PHD
DDT
TFIIA
Motif
Other DBs
NCBI-GeneID:
115131908
NCBI-ProteinID:
XP_029519848
EnsemblRapid:
ENSONEG00000008619
LinkDB
All DBs
Position
LG7:complement(30804148..30843485)
Genome browser
AA seq
2724 aa
AA seq
DB search
MESNNHFNYGSHSSVSANSGLKLSSGDSLYSNRSSMSFPPQGKNMNGEMNVNGVTTVIGP
SVPGSQLPTASYPHMSNHHQSSMGYDYMWGGQPQYSPAMGSSPGHGMHQKQPPPGGMQQQ
SQHHFQGHGQYQLNGGMPGSRQPPVAAPPNVTLTGGQYWNRGNPGQQQSSTAMAMGYNSQ
GVYGSYQSQVHPGIAPSQHHQQQPPQSSPHQQTQQHLHPHHHPHHQQQHQQQPQHYSMVP
NGIPYYQPQHPPLPAPQPQPPSQSQSQAQMMPPTSQNFTPPRGSPQHHHIGRGGTGSPLP
LGMSSVPMMSPSTMADSESPQSQTRERSPHRGTVGMPAVMQGRMSEVFKDVDKGYNGMER
ASVTQLLPKSDSYHPKPPGPPMGPTIDYCQRSEQPMAQHHEMATSARESAPPAPPHSMSS
HPPAVSAPSTHSRLSAPPAMSTPPMGTLGPPVVSSFSVSPAPPRNSAAPMSSSPSLPVLG
PPPGLSSPPLMSTRPSPVSLSTPPSVASPPSSVSVTLPKPPAPPLLLDKSSIPPAVSAPH
PVSAPPPVSVAHQTAPMTSAPPAMVSTPTMVGAPSRSMSAPISALQQMVQGSRPPPLTSS
PTALSGAPREKFWTPSISAVAPPPRVSVSPPAVSTTLVAVRQNSSAVPSPPWAVSAPSIS
VSSPPRSVSTPPPAVSAPSTESASAVSSSPKEVSMPPLTVQGPKVQAPGVSSTSEPPALV
FVPRAVMTALHMVPSTPPAVSAPSLSVPAPPQAPKCMFSAEPKERDMGNKKAMGNKKEPF
VEPPGKLEASSPQPKVDPFRTPSKMDATKSLTRQSEKHSHKPLTDIPGTPPPPKDQENSF
GDKMRAERMDTAPLRHSYSPLERRGLDDTCETDESAFEESADESSQVSTCLDSTRMEKTS
FTEEDGACNDSSLNDTSQFGDTSRLGANSRMDDTSRLDDSFRVDGETSRFDDTSRMDEDC
SRLDVTSQLDDSSRIDHPSREDEISHVADTTIDSSFSSVEDSRDLTLDDTQTEDSSQAEE
TIDSCLSTGVSMLDSSLTNTSQMEDSCVESSQNDVSRSSSNGPAKPPPAYKGFEGECESE
GQDIPDCAGTTKASAVSIMAPPVMDKGEHTAALSSLVGNLVAAPLLPLAAPAVPTTSQKT
PRKPRKPRTPAASTPVPRVPGQAQRRSAVKTPKVDKIKVERKKKKKLEKGEVVEKKEKGP
PRKRKKTESVAVTEEAERSAEGLLSCQSGPVTTSNESCMTSGETPPAIKPKKVRVKNLEP
MPPKIAKIDVNTKPNDGNNDNDGDDSSTAGDTPRRRIATEEQVHFPLLHGWRREVRVRKT
EDRLKGETWYYSPCGRRIKQFPEVIKYLNRHKDTAVTREHFSFSPRMPVGDFYEEMDSAE
GVKWCLLANEEVPSMIMAITGRRGRPPNPDKEKPRPRARRAKGGLVRKPGRPPKPKMVDL
LSKVDARMLERLEAKEALTEEDKEKLVKIKKKMKRKARMKRKENNKNKKIRQEKKQAKLD
KAKETKDQEEVKAEPADQEPPQPAPPQPPAPEPKKRGPRKKKAEVPLPVVETDQERVAQG
KRVLGARSKAKALAKAQAEAEAAAQAALAAKKQVERRAQSQRRLEERKRQQMILEQLKKP
TEDMCLTDHQLLPELSRIPGVVLSGVAFSHCLTVVEFLHSYGKVLGLHIPMDVPSLSTLQ
ESLLGLGDSQGEVQDLLIKLVEAALHDPGLPPYYQSVKILGEKLVDLELTRSTVSEGLRI
FLESHGFDMEVCNVLRTKTFHALGPDTKAAILGFLVEVLNGSNIVISEIDNTLENMATYR
KNKWIIEGKLRKLKAALARRTGRSEEELCLEERRCSARVAEEENLILQGSSAMQRGRRTP
KEEPKLGDTDSPTNDSVPELERQIDKLTKRQVFFRKKLLQSSHSLRAVSLGQDRFRRRYW
VLPHLVGVLVEGPEEILASEDILVKEVPITLLKREPKVEETLTPTTPPAPLPSPLPPKSQ
TSFPPEEDPLPGTASLMSSPRARGRPRKIKLEVELHLRTAKCRRRRRSSKSGGEETRPSV
APEATTNGSQDLTQSAFHNWLSHLQGAITNGTEPATGSQPEDSVKEMAEKQGQWFNLLPK
QPCDKTSLTEPQTPPSTPPKRLPLTPSTLPALAAPLLQSVPAPTDSPPQVAPTQTPTPAK
PGRRRRRGSRGSSPARRVGARGAAAKRRGRPPSTLFQEIEQQYFTQLVVKPIPASMVRGW
WWIKEPEELTATLQALHPRGIREKVLHKHLAKHMEYLAEVCTRPINDTIFQVKVEVGEAL
LEALQQPWQVQERALETDVSALRWVEDLERRVIAADLHLKMAPQNGRSDTDNSTETPGAG
FQPYTVPEADSTRDDLRYYEHDTDPRDDWIVRTKKEWSDLPRVASHPLDLAVLRLANLER
NIDRRYLKEPLWNLAEVVRLAPLTPEESQMGQMDVMSLESEITSRLRTWRQALDRCRSAP
QLCLCLLQLEKAIAWERSVVKVTCQVCRKGDNDEYLLLCDCCDRGCHMYCLRPKVTQVPE
GDWFCPTCFSKASDGESPHSKQRSSKQRTRVKKRRYEDDSSDEETVPSRRSGGGDGMAMR
HKDGGPASSSSSRYSGDGGCTTGFSPAKRRRMTTRNQPDLTYCEIILMEMESHADAWPFL
EPVNPRMVPGYRRIIKNPMDFLTMRERLLQGGYCSCEEFAADAHLVFNNCEQFNEDTSEV
GMAGHSMKRFFENRWAEFYESKDK
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaaacaaccatttcaactatggcagccactcctccgtgtctgctaactcagga
ctgaaactctcctcaggggattctctctattctaacaggtcctccatgagtttccctcca
caggggaagaatatgaatggcgaaatgaatgtgaatggcgtcactactgtaattgggcct
agtgtgcctggctcccaacttccaacagcctcatacccccacatgagcaaccaccaccag
agtagcatgggctacgactacatgtggggaggacagccacagtacagcccagccatgggc
tcgtctcctgggcatggcatgcaccagaagcagcctccacctggggggatgcagcaacag
agccagcaccacttccagggtcatggacagtaccaactgaacgggggcatgcctgggtcc
cgtcagccacccgtggctgccccaccaaacgtgactcttacagggggccagtactggaac
aggggtaacccggggcaacagcagagcagcacagccatggcaatggggtataactcacaa
ggtgtgtacgggtcctaccagagccaggtgcaccctgggattgcgccctcacagcatcac
cagcagcagcctccacagtcatcccctcaccaacagacacagcagcaccttcacccgcac
caccacccacaccaccagcagcaacaccagcagcaacctcagcactacagcatggtaccc
aatgggattccctactaccagccccagcacccacctcttcccgctccacaaccccagccc
ccatcccaatctcagtcccaggctcagatgatgccccctacctcccaaaacttcacccct
ccacggggcagcccacagcaccaccacattggccggggaggcactggcagccctctcccc
ctggggatgtcctctgtcccaatgatgtcaccctcgacaatggcggatagtgaatcgccc
cagagccagaccagggagaggagtccccatagaggtactgtggggatgcctgctgtcatg
caagggcggatgagtgaagtgtttaaggatgtggataaaggttataatgggatggagagg
gcgtctgtcacccagctgctgcctaaaagcgacagctaccatcccaagccccctggaccc
ccgatggggcctaccattgactactgccagcgctctgagcagccgatggcccagcaccat
gaaatggcaacctcagcgagggagtctgcgccacctgcgcctccacactcgatgtcgtcc
catcctccggctgtgtctgcgccttccacccattctaggctctctgcacctcctgcaatg
tctactcctccaatgggtacattaggacctcctgtcgtttcatccttctctgttagtcct
gcgcctccccgaaactcagcggctcccatgtcctcttctccttctctccctgtgcttgga
cctcctcccgggctgtcttcgcctcctctgatgagcacaagaccttctccagtgtctttg
tccacacctccatcagtggcatctccaccctcgtcagtgtctgtaactcttcccaagcca
cctgcaccacctcttctcctggacaaatcctctatacctccagctgtgtctgctccccat
ccagtcagtgctcctcccccagtgtctgtggcacatcagactgctcccatgacatctgcc
cctcctgcgatggtctctactcctactatggtgggtgctccctcgcgctccatgtctgcg
cccatctctgcacttcagcagatggttcaaggatccagaccaccacctttgacttcctct
cccacagctttatctggagctcctcgagaaaagttttggactccatcaatatctgcagtt
gcacctcccccaagggtttctgtgtcccccccagcggtgtctactaccttggtggcagta
aggcaaaattcctcagcagtgcccagtcctccttgggcagtcagtgcaccttctatatca
gtgtcctcacctcctcgatctgtgtctactcctcccccagcagtttctgctccctccaca
gagtctgcgtctgcagtgtcctcgtctccaaaggaggtatctatgcctcctttaacagtt
caaggccctaaagttcaagcccccggagtttcttcaacgtctgagcctcctgccttggtg
tttgtgcctcgtgcagtgatgactgctcttcatatggtcccctcaacccctcctgctgtc
tctgcgccttccctatccgttcctgctcctccacaagcccctaaatgcatgttttccgct
gagccaaaggagcgagacatggggaataagaaggccatgggcaacaagaaggaacccttt
gtagaaccacctggaaaactagaggcgagttctccacagcctaaagtcgacccatttaga
acaccatcaaagatggatgccaccaagtctcttactcgtcaatctgaaaaacactcacac
aaacccctcacagatattcctgggactcctccgcctcccaaggaccaagagaactccttt
ggcgacaaaatgcgtgcggagagaatggacaccgcccccctgagacactcatactctccc
ctggagagaagaggtctggatgacacctgtgagacggacgagtcagcgtttgaggagtct
gcggacgagtcgtcgcaggtgtccacgtgcctcgacagcaccaggatggagaaaaccagc
tttactgaagaggatggcgcttgtaacgactcgtcactcaacgacacatctcagtttggt
gacacttctagacttggcgctaactctcgaatggatgacacgtctcgattggatgacagc
ttccgtgtagatggtgaaacctctcggtttgatgatacctctcgcatggatgaagactgc
tctcgattggatgtcacctctcaattggatgacagctctcgcatagatcacccctctcgt
gaggatgaaatatcacatgttgctgacactacaatagatagcagcttctcctctgtggag
gattccagggacttgacgctggatgatacccaaacagaggactcttcccaggcagaggag
accattgacagctgcctgagcaccggggtgtccatgctggattcctctctgaccaacacc
tctcagatggaggactcctgtgttgaatcctcccagaatgacgtctcccggtcaagctca
aatggccctgccaaaccacccccagcctacaaagggtttgaaggggaatgtgagtcggag
ggccaggatataccagactgtgctggcaccaccaaggccagtgccgttagtatcatggct
ccccctgttatggacaaaggcgagcacacagcggcgctcagttccctggtggggaacctg
gttgcagccccactcctgcccttagccgccccagccgtacccaccaccagccaaaagaca
ccaaggaaacccaggaagccacgcactccagcagcctccactcccgttcctcgggtcccc
gggcaagcacagcggaggtccgctgttaaaactccaaaggtggataagataaaggtggag
aggaagaagaagaagaagcttgagaaaggagaggtcgtagagaaaaaggagaagggacca
ccaagaaagagaaagaagacagaatcagtagcagtcacagaagaggctgaacgttctgct
gaaggcttactttcttgtcaaagtggaccagtcactaccagcaatgaatcatgtatgacc
agtggcgagaccccgccggccatcaaacccaagaaggttagggtcaagaatctggaaccg
atgccacccaaaatagcgaaaattgatgttaacactaaacccaatgatggcaataacgac
aatgacggagatgacagttccactgctggtgacacccccaggaggaggatagcaacagag
gagcaggtccacttccctctgctccatggctggaggagggaagtccgagtcaggaagact
gaggaccggctgaagggggagacctggtactacagcccctgtgggagaaggattaagcag
tttccagaagtcatcaagtacctgaacaggcacaaggacactgctgtgaccagggaacac
ttcagcttcagcccccgcatgcccgtaggagatttctacgaggagatggactccgctgag
ggagtgaaatggtgcctcctggccaatgaggaggtgccttccatgatcatggccatcacg
ggccgacgcggccgacctccgaaccctgacaaagagaagccccgcccccgagctcggcgc
gccaagggtgggctagtccgaaagcccggcaggccgcccaaaccaaagatggtggacctg
cttagcaaggttgacgccagaatgctggagaggctggaggccaaggaagctctgactgag
gaggacaaggaaaaacttgtcaaaatcaagaagaaaatgaagagaaaggcaaggatgaaa
agaaaggagaataacaagaacaagaagatccgacaggagaaaaagcaagcgaagcttgac
aaagccaaggagaccaaggaccaggaggaggtgaaggctgaaccagccgaccaagagccc
ccacagcctgcccccccacaaccgcccgccccagagcccaaaaagcgtggccctaggaag
aagaaagctgaggtgcctttaccggtcgtggagacggaccaggagagggtagcccagggg
aagagagtgttgggggccaggagtaaggccaaggccctggctaaggcccaggcagaggcg
gaggctgcagcccaggcagccctggcagctaagaagcaggtggaaaggagagcccaatcc
cagagacggctggaggagaggaagagacagcagatgatcttggagcagctgaagaagccc
actgaggacatgtgtctcacagaccaccagctccttccggagctgtctcggatccctggc
gtggttctctctggcgtggccttctcccactgcctgactgtggtggagttcctacacagc
tatggcaaggtgctgggcctccacatccccatggacgtgcctagcctcagcacactgcag
gagagcctcctgggcctgggagacagccaaggcgaggtccaggatctgctcatcaagctg
gtggaggctgcactacacgacccaggcctgccaccctactaccagtcagtgaagatccta
ggggagaagctggtggatctggagctgactcgcagcacagtgtccgagggcctgcgaatc
ttcctggagtcccacggctttgacatggaggtgtgcaacgtgctgcggaccaagaccttc
catgccctcggccccgacacaaaggctgccatcctgggcttcctggtggaggtcctcaac
ggtagcaacatcgtcattagtgagattgacaacacactggaaaacatggctacttacagg
aagaacaagtggatcatcgaggggaaattgcgcaaactgaaggcagctctagcacggcgt
acagggcgctctgaggaggagctgtgtctcgaggagaggaggtgcagtgccagggtggca
gaggaggagaacctcattctacaagggagcagcgccatgcagaggggccgccgcacaccc
aaggaggagcccaaactcggcgacactgacagccccaccaatgacagcgttccagagttg
gagaggcagatcgataagctaacgaagcggcaggtgtttttccgtaagaagctgctccag
tcgtcccactccctgcgtgcggtctctctgggccaggaccggttccgccggagatactgg
gtcctgccccacctggtaggggtgctggtggaggggcctgaggagatcctagcgtcagag
gatatcctggtgaaggaggtgcctatcactcttctgaagagggaacctaaagtggaggag
acgctcactcctacaactcctcctgcccccctcccatcccctctccctcccaagtctcag
acttccttcccccctgaggaggaccccctccctggcaccgcctctctcatgagcagcccc
agggcccgtggtcgcccccgcaagatcaaactagaggtggagctacacctccgcactgcc
aagtgtcgccgccgtcgccgtagcagcaagtccggcggggaggagactaggccaagcgtt
gccccagaggccaccaccaacggctcacaagacctcacgcagtccgccttccacaactgg
ctcagccacttgcagggcgccataactaacgggacggagccagcaacaggcagccaacca
gaggacagtgtgaaggagatggcggagaaacaggggcagtggttcaacttgctgcccaaa
cagccatgtgacaaaacctctctgacagaaccccagaccccccccagcacaccccccaaa
cgcctccctctgacccccagcaccctgcccgccctcgccgctccactgctgcagtctgtc
ccagcccccacggactccccaccccaggtggcccctacccagacccccaccccagccaaa
ccggggcgcaggcggaggaggggcagcaggggcagcagtcccgcccgtagggttggggct
agaggggctgcagctaagcgtcgtggccgccctccttccacgctcttccaggagatagag
cagcagtacttcactcagctcgtggtcaagcccattccagcatcgatggtgcgtggctgg
tggtggatcaaggagcctgaggagctgacggctaccctgcaggccctgcacccgcgaggc
atacgggagaaggtgctccacaaacacctggccaaacacatggagtacctggctgaggtc
tgcacacgacccatcaacgacactatattccaggtgaaggtggaggtcggcgaggccctg
ctggaggctctgcagcagccgtggcaggtccaggagcgggccctggagacagacgtcagc
gccctccgctgggtggaggacctggagcggagggtcatcgccgctgacctgcacctcaag
atggctccccagaatggaaggagtgacactgacaatagcacggaaacgccaggcgcagga
ttccagccctacacggtcccagaggcagactccacacgtgacgacctgcggtactacgag
catgacacggacccccgggacgactggatcgtgcggaccaagaaggagtggtcggacctg
ccccgcgtggccagtcacccgctggacctggcagtcctgcgcctggccaacctggagagg
aacatcgaccggcgctacctgaaggagcccctctggaacctggctgaggtggtgcgtctc
gccccgctcacccccgaggagagccagatgggccagatggacgtcatgagtctggagagt
gagataacctccaggttacggacatggcgtcaggccctggatcgttgtcggagcgccccc
cagctgtgtctgtgtctgctgcagctggagaaagccatcgcctgggaaagatccgtggtc
aaagtgacgtgtcaagtgtgcaggaagggggataatgatgagtacctgctgctgtgtgac
tgctgtgaccgcggctgccacatgtactgcctgaggccaaaggtcacccaggtgccagag
ggggactggttctgccccacctgtttctccaaggcgagtgacggtgagtcaccacatagt
aagcagcgctcctccaagcagaggacccgggtgaagaagaggaggtacgaagacgacagt
tctgacgaggagacggtgcccagcagacgtagtggcggtggtgatggcatggcaatgcga
cataaggacggtggccctgcctcatcctcctcctcccgttactcaggagacgggggatgc
acgacgggcttctcgcccgccaagcgccgccgcatgaccacccgcaaccagcccgacctc
acttactgcgaaatcatccttatggagatggagtctcatgctgacgcctggcccttcctg
gagccagtcaacccccggatggtgcctggctaccgacgcatcatcaagaaccccatggac
ttcctcaccatgagggagaggctgctacagggagggtactgcagctgtgaggagtttgca
gcggacgcccatctggtgttcaacaactgcgagcagttcaacgaggacacgtccgaggtg
ggcatggctggacactccatgaagcgcttcttcgagaaccgctgggcggagttctacgag
agcaaggacaaatag
DBGET
integrated database retrieval system
