Oncorhynchus nerka (sockeye salmon): 115131925
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Entry
115131925 CDS
T07952
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K26585
methyl-CpG-binding domain protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115131925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115131925
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115131925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
115131925
NCBI-ProteinID:
XP_029519882
LinkDB
All DBs
Position
LG7:complement(31351503..31362190)
Genome browser
AA seq
1535 aa
AA seq
DB search
MMGGSESGSGDTDGVHTVAIQVPIGWQRRVEDGLVVYVSPSGTFLSSLEEVKSYLLTDGT
CKCGLECPLVIHKVFNFSLGVKVQQRSQPVGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPYVSCHTEVTSAIMENRDPKRMRVDREEEERGTYPSKHHLVHSRPNNNLNHNPCGSPK
YSTQLVYSYNGSSPLSHASTNSHHSPEILKRLPPPLHFPPTTSQFSSYGAPQRSPCTPTS
HNFSQGQRTPQTPEAPRSPHLGPLSPLPPSSPGTLGRGGQSHPHGIIIGSLLSPSCSPSP
RQRSRHPSASSSLSEQEVGGVVLGGYPPRRISSSSPHSPLPGGSPNLHFPKYKLEDILEQ
FRNSGNGSTNNHILNTNSLSNQSNPQILSLALEKGEKPSKAPASATGSGMGISAGPSGLP
LGQFLNHQKQPHTASFPASSLLSAAAKAQLASQMAHDHSSNSASVLSSATSLEVSKESRQ
SKVTNSTLHNNSHPSITRPLPAASHLLLHPCATLSQPLASSPLHLSPTDRTSHRKRQRRS
PTVLSMLKDSQVSGLRTPGDVLNLSSLHSQPSSTSGSSHSATSENHLQGLRLSVRHSCPL
TGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSMQNAQAAGAQPGSGHGTGGTRQSP
RQSPSPSHLNIRPFPMQSPSHPCTMQGLSQPLSPTQSLSRLGSASAQSPHTKTSPKQRRS
PSTALSNAQSAHHRSSPSPTRHTPDRLRQAQNQPMDTTTTLQSPMCQTLPDVSASVIESI
STLGPGLSLSHPPNSTPTSNHRATVTSCSSTTSPRPLDLSNHVLALLAASSTTPLEEGGL
DTTTGNNTAGVQEPESVDHRSSTVSKTPGGCSPGSCNTPSLGDSPGSLPLAEAFPFMSQE
QLLQLLSATAGLPSLLDPTILGSLPLGLWLGGQQCHLPTSNTSQQHHQLPDHHHHQQQSE
HQQLLLQHEQHQEQHQKQQQTAHLNHNFPFSLLPSLMGGQGELPLNLLGLLNPLLPPSAT
LTPGQEGDLGIGEKLGLQALLMASLLLGQQQAAMLPLSGLGQLSLDLPLQQQHIPALLES
LSLDKGSGLLDLSSLPGPGLLEALQGLLPPAEGPLQALQSLLLPAPLPPPGFLSLSPTLL
NAALGSTDLPTTPQLPLPQQPPPQVSNSGPDGGVDTLIPLSVQGKDNPVLHQLLPTLLNP
GLLGDLSALTSLHSLLGLGAGPLLLPPVQTSALGMPLLQGPDGAINLLNNIQLNMAPPSE
GEKTISLQEKDSPAPQEDIPANRLTPEAVPSPCPVRTPVSQRGEGSVGSVLDPYASFMDT
IYTSFLQVSAKEQEASQTGADVLCALPPSYPGEPPAPSAPLSLSPRLACSLRNPELSRLN
LEAAHSPAQGTPKPSNDGSSTPLQSKPGVPEGHTNPPLPPIYLEEAKTESYSQAVTDRNG
DRPQAGGYLSPRDGGSCPKDETVGLQHIEQGRNLTAQTAGARRGRKRKQTLQNVLEDFRD
LDAPALEEPKPTVVLLKPERSVRGRRRRGARSQRQ
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagagtggcagtggagacacagatggagttcacactgtggcaata
caagtccccattggctggcagaggagagtggaggacgggcttgtggtgtatgtcagtcca
agtggcacgttcctgtcttcactggaggaggttaagtcttatctgttgaccgatggcaca
tgcaagtgtggcctggaatgtccgctggtcatccacaaggtgtttaactttagcctaggg
gtcaaagttcagcagcgcagccagccggtggggaaggcagagcaggacatgacaaagctc
tgtaaccatcgaaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggcttca
cagctgccctatgtttcctgtcacacagaggtcaccagtgccattatggagaaccgagat
ccaaagaggatgagagtggacagggaagaagaagaacgtggcacttatccctctaaacac
catctagtccactccaggcccaacaataatctcaaccacaacccttgtggcagtcctaaa
tattctacccaacttgtgtattcttacaatggttcctcacccctctcacatgctagcact
aactctcatcactctcctgagattctgaagagactgccccctcctctccatttccctccc
accacctctcaattctccagctatggggcacctcagaggtcaccatgcacccccacatct
cacaacttcagtcagggtcagaggacaccccagactccggaagcccccagatctcctcat
ttggggcccctctctccccttcctccctcctcccctgggacactgggaaggggagggcag
agccacccacatggtatcatcattgggtctctcctgtccccctcatgttccccctctccc
cgccagcgctcacgccacccctccgcctcttcctcgctttctgaacaggaggtgggaggg
gtggtgctgggcggctacccccccagaaggatatcctcttcttccccacactctcctcta
cccggggggtcccctaacctccatttccccaaatacaagctcgaggacatcttagagcag
tttaggaactcaggcaacggtagcactaataatcacatccttaacacaaactcactgagc
aaccaaagcaatcctcagatcctctctctagctcttgaaaagggtgagaagccctcaaag
gcacctgcttctgccaccggctcaggcatggggatcagtgctggtccttctgggttgcct
cttggacagttcttgaaccaccagaagcaaccacacacagcctcgtttcctgccagtagc
ctcctctcggcagcagctaaggctcagctggccagccagatggcccacgaccacagttcc
aattcagccagcgtcctcagctcggccacctctctggaggtctcgaaagagtcccggcag
tcaaaggtaacaaacagcactttacacaacaacagccatccctccatcactaggcccctc
cctgcagcctcccacctgctcctccacccctgcgccaccctctcgcagcccctagcctcg
agtcccctgcacctctcccctacagaccggacgtcccacaggaagcggcagcggcgttcg
cccacggtgctcagcatgctgaaggactcccaggtgagcggtctcagaacccccggtgac
gtgctcaacctctcctccttgcactctcaaccctcctctacctcaggctcgtcccactct
gccacgtcggagaaccacctccagggtctgaggctctcagtccgacactcctgcccgctc
acaggtcctcagaagcagcctgacggcgccctggacttcactacaatcatggcaggtcaa
ccggatccccccacccagcctctctccgctctgcttcacctgctcagtatgcagaacgcc
caagccgccggagcccagcccggctctggacacggtacaggaggcacgaggcagagcccc
aggcagtctccctctccctcccatttaaacattagaccattccccatgcagtccccctct
catccctgtaccatgcaaggcctgtcacagcccctgtctcccactcagtcattgtccagg
cttggtagtgctagtgcacagtctccacatacgaagaccagtcccaaacagagacggtct
ccctccacggccctgtccaacgctcagtcagcacaccatcgcagtagcccctcgcccacc
cgacacactcctgataggctacggcaggcccaaaaccaacctatggataccaccaccacc
ttacagtctcccatgtgccagaccttgcctgatgtcagtgcatcagtgattgagagcata
tcaacactaggccctggtctcagcctgagtcatcctcccaacagcacccccacctccaac
catagagccaccgtcaccagctgcagcagcaccacctcccccagacccctggatcttagt
aaccacgtgctggccctgctggcagcctcctccaccacgcctctggaggaagggggcctg
gacacaaccaccggcaacaacactgcaggggtgcaagagcctgagagtgttgatcatcgt
agctcgacagtgagcaaaaccccaggaggttgcagccccggctcctgcaacaccccttcc
ctaggggactcccccggctccttacccttggccgaagccttccccttcatgagccaggag
cagctcctccagcttctgtctgccacagccggcctgccctccctcttggatcccaccatc
ctgggctccctgcccctgggcctgtggctgggcggtcagcagtgtcacctccccacctct
aacacctcacagcaacaccatcaactgcctgatcatcatcatcatcaacaacaatcggaa
caccaacaactactgttacagcatgaacaacaccaagagcaacaccagaaacaacaacag
actgcccatctgaaccacaactttccgtttagcctactcccctctctaatgggaggtcag
ggagagctgcctctcaatctcctgggtctgttgaacccacttctacccccctctgccacc
cttaccccaggccaggagggtgatctgggtataggggagaaactgggcctccaggctctc
cttatggcctccctgctccttggccaacagcaggctgccatgttgcccctgtctgggctg
ggccagctgagcctggacctccccctgcagcagcagcacatcccagccttgttggagagt
ttgtctctggataaaggctctggactcctggacctatcctccctccccggccctgggctc
ctcgaggccctccagggcctgctgcccccagccgaggggcccctccaggccctgcagtcg
ctcctgctccccgctcctctccctcccccgggcttcctctccctcagccccactctgcta
aacgctgccctgggctctactgacctcccgaccacccctcagctccccctaccccaacaa
cccccacctcaggtctccaattcaggccctgatgggggggtggacaccctcatccccctg
tctgttcaggggaaggacaaccctgttctccaccagttactgcccactctcctcaaccca
ggcctactaggagacctgtctgctctgactagcctccacagtctgctggggctaggtgca
ggccctctcctcctcccccccgtacagacctctgccctgggcatgcctctactccagggc
cctgatggggccatcaacctcctcaacaacatccagctcaacatggcgccgccctccgag
ggagaaaagacaatctccttacaggaaaaagacagccccgcccctcaggaggatattcca
gccaatcggcttaccccggaggctgtgcccagcccctgtcccgtccgtacccccgtgtcc
caacgtggtgagggctccgtggggagcgtcctggacccctatgcctccttcatggacacc
atctacacctctttcctccaggtcagtgctaaagagcaagaagcatctcagactggggcc
gacgtcctctgtgccttacccccctcctaccctggggagccccctgccccctccgccccc
ctgtccctgagccctcgcctggcctgctccctgaggaacccggaactgtcccggctcaac
ttggaggcggcccactccccggctcagggcacccccaaacccagcaacgacggctcgtcg
acacccctgcagagcaagccaggggtcccagagggccacactaacccccctctgcctccc
atctaccttgaggaagccaagaccgagtcgtacagccaggctgtcacagataggaatggg
gacagaccccaggcaggggggtacctgagccccagagatgggggcagctgccccaaggat
gagactgtgggtctgcagcacattgagcagggcaggaacctaactgcccaaacggcggga
gccaggaggggcaggaagagaaaacaaacgctacagaatgtgctggaggatttccgagat
ctggatgctccagccctagaggaacctaaacccacggtggtgctgctgaagcctgagagg
tcggtccggggcaggaggcggcggggtgccaggtcccagagacagtga
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integrated database retrieval system
