Oncorhynchus nerka (sockeye salmon): 115132018
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Entry
115132018 CDS
T07952
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115132018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115132018
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115132018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
OMP_b-brl
Motif
Other DBs
NCBI-GeneID:
115132018
NCBI-ProteinID:
XP_029520043
LinkDB
All DBs
Position
LG7:34050497..34080383
Genome browser
AA seq
1608 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSSTEAETADTTTQATASTATAGPTE
GGEQESCDSMETIAASGENDASVDESSSSASCSTEPQTRLSRSGVSGQVRSEAQAQTRLS
RSRQSGRQRKKAVMMPRVVLTPLKVNGDHVPSGAAGRRREGSRGGPGPTLRARPELASWK
RPQHFKSIRGHHSGPMKRSRGGVEVDFETPGSILVNTNIRALINMRTFSAFPAQYQQQLL
QLLPEVDRQAGPDGLARLSNSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEK
KVEAWKEKFFEEYHGQKSGLTREESLKLTMSEEADAAASVLESEVASVAAGTPKRRGVGR
RRRDGRMRRRTRADMRRRARRTLCKTNSPAMQIPEQPEGTLTLDAVASVSAPSPVPEATM
VQGEVVLQAESGLETPAQSASLEPTPCPSPVPTLLSVTVPEPEPTPTPSPSPASVSAIDE
PEVTARLLPEELAPAIASTSPSSSSSSSSSSSSPSSSPSSTSERQGAFTTGLDSSSSSSS
STAAATADPLDDGASVVTSVTGGTATSSQESSPAASPTPTAATSTQTKEQKRRPDETQAF
SSFPEKRPRIEDRQSFRTTIDGFHTEKPQPTAEEPKVPPIRIQLSRIKPPWVKGPPTYQI
CPRIVPPGEGLRRTGTGARTLADIKARAQQARAQREAAAAVAATGDGPGPGGGRAGSGLP
DRSSGRRTREHPGPVEPGGGGGGAAGGVEEQGSPAGSHPPGTQLQLSNVEPSSTPTPHTA
ASSPSLSTSSNPSLSSSEPPQTPTPPLPALEERLGELSGEEGATLTPPPVKCTTNGLSDK
PALLKPETVSSHLQGQSEGADCDRTTTQSGPLAPTSIPDSLPRFGAQGVDVIRSLAGTEQ
ARGGGGGVIQHGSHHVGPQENPPTPAREGRIQGERQQSEPPGRERETASLPRLPPSVRED
DAGHHSDSTETASDCENESQEEEPHLSTWRHHLPAQRNGNIQHLQRLSQKAHGQPVICSP
PSQQNQQPVIQAHVSNQHGQTVIQPCFPNGLPSQSLMQPGQNPQQPGRTPHPDQQAIAVP
HPKAQRGHKTDSIEDYKASSRCLADEDCRLGLNPSPTASCKRLPSSARPVSTVEANNPLV
TQLLQGSLPLEKVLPQTHSASKLEINRLPEGLQSGPQSQLSRQQQTRNPGTRFRGPPESG
TMESLVPELSSQNQQKSPAGRGGSPGAGRSFASSPPGTVPSRMACLLEEASSRATAMQQY
LSQQPAGAVPPGAVPVITSLSSSSSSSRRNSQESAVIRESPERHHNFTQPRATPDAPSPP
HSNLGLSDMVPTVKINWHPSKPHPPHQQQLSPVKSEVTSRPSCQTLAKTSPSGPMAGGGP
GVVVTKKEAVNSMDGYLTGGGIGGGGAMEGLLNMEMSLARMAKKEAQSKAQYSSSSPSSL
PFQLYGKLPKQGGVASPGFSYTANVSVVDGSGFSRSIADGVLQLRQRHSASQSATLSIQA
FADSAAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagagaaagaaggaacgcacgtgggctgaggcggctcgcatggtt
ctagagaacttctctgatgcccccatgacgcccaagcagatcctgcatgttatccagacc
aaaggactcaaggaaatgagaagtggcacggcccctctggcctgtctggtgaccatgctg
cactcccaggtgaggggggaccgagtaaagaacagcatcttcttcaagcttcctggcagg
atgagtctgttcactttaaagaagaacgctctgcagtggaccaagagttcgacagaggcg
gagacagcggacaccaccacacaggctaccgcttccactgcaacagcagggccaacggaa
gggggggagcaagagagctgtgactccatggaaacgattgcggccagcggagagaatgac
gcgtcagtagatgagagctcatccagtgcgtcctgctccacagagccccagaccaggctg
agtaggtctggagtctctggacaggtgcgctccgaggcccaggcacagacccgactaagc
cgatccagacagtcgggcagacagaggaagaaggctgtgatgatgccgcgcgtggtcctc
actccactcaaggtcaatggtgaccacgtcccatcaggagcagcggggaggcgcagggaa
ggctctagggggggtccaggccccacgctccgtgcccgccctgaactggctagctggaaa
cgcccccagcacttcaagagcattcgtggccaccactcagggcccatgaagaggagccga
ggtggggtggaggtggactttgagacgcctggctcaatcctggtcaacacaaacatcagg
gcactcatcaacatgcgcaccttctctgccttcccagcgcagtaccaacagcaactcctg
cagctcctccctgaagtcgaccgccaggcgggacctgacggtctggctcgcctcagtaac
tctgctctcaacaatgaattcttcactcacgcctcccagagctggaaggaaaggctcgct
gagggggagttcacccacgagatgcaggtgcgatttcgccaggagatggagaaagagaag
aaagtggaggcatggaaggagaagttctttgaggagtaccacggtcaaaagtctggcctg
acccgggaagagtctctgaagttgacaatgagtgaagaggccgatgctgccgccagcgtc
ctggagagtgaggtggcatctgtggctgcaggaacgcccaaacgccgtggtgtgggcagg
cggcggcgggacggcaggatgagacggcgaacgcgtgcagacatgagacgcagggcgcgg
cgcaccctttgcaagaccaactcccccgccatgcagatccccgagcagccggagggcaca
ctcactctagacgctgttgcctctgtctctgcgccctcgcccgtcccagaggccaccatg
gtgcagggagaggtggtgcttcaggccgaatctggactggagaccccggcccagtctgcc
tccctagagcccacgccctgcccttcccctgtgcccacgctcctgtctgtgaccgtgcct
gagcctgagcccaccccgacccccagccccagccctgcatccgtcagtgccatcgacgag
cctgaagtcactgcccgcctgctccccgaagagcttgcacctgccatcgcctcaacctct
ccctcctcctcgtcctcctcctcctcctcgtcctcctccccttcctcctctccctcctca
acctcagagaggcagggggcgttcaccaccggcttggactcttcttcctcttcctcctcc
tccacggccgccgccactgccgatccactagacgatggggcctctgtggtcacctcggtc
acggggggaacggccaccagcagccaggagagcagccctgcagccagccccacccccact
gccgccacctccacccagaccaaggagcagaagaggaggccagacgagacccaggccttc
tccagcttccccgagaagaggccgcgaatagaagatcgtcagtcctttcgtaccacaatc
gacgggttccacacggaaaagccgcagccgacagcagaggagcccaaggtcccacctatc
cggattcaactctccagaatcaaaccgccctgggtcaaagggccgccaacctaccagatc
tgtccccgcattgtgccccccggcgagggcttgcggcgcacggggacgggggcgcgcacc
ctggcggacatcaaagctcgcgcccagcaggcccgggcccagcgcgaggccgctgctgct
gttgcagccactggggacgggccagggcccggcgggggcagggctggttctgggctaccg
gatcgcagcagtggaagacgaactcgagagcacccaggacccgtcgagcccggaggagga
ggaggaggagcagcaggaggcgtggaggagcagggatcgcctgcgggctctcatccgcct
ggaacacaactacagctgtccaatgtagagccctcctctacccccaccccccacacagct
gcctcatccccctctctgtctacctcctccaacccctccctgtcctcttcagagcccccg
cagacccccactccacccctacccgccctggaggagcggctgggggagctgagtggggag
gaaggggctacactaacaccaccaccagtcaaatgcaccaccaacggactctcggacaag
ccagcgctgctgaagcctgagactgtgtccagccacctccaagggcaaagcgagggggct
gactgtgacaggacaacgacccaaagcggtcccttggcacccacctccatcccagattct
ctgcccaggttcggggcccagggagtggatgtgatcaggtccctggccggcaccgagcag
gccagggggggaggagggggtgtcatccagcatggttcccaccacgtgggtccacaggag
aacccccccaccccggctagagagggccgcatccagggcgaaaggcagcagtcggagccc
ccggggagggagagagagacagcctctctccctcgtctcccaccctcagtcagagaggac
gacgcagggcatcacagcgactccacggagacggcctccgattgtgagaacgagagccag
gaggaggagccccacctgagcacatggcgccaccacctgcccgctcagcgcaacggcaac
atccagcacctccaaaggctgtctcagaaggcccatggccagcctgtgatctgcagtccc
ccttcacagcagaaccagcagccggtcatccaggcccatgtgtccaaccagcacggccag
acggtcatccagccctgcttccccaacggcctgcccagccagagtctcatgcagccggga
caaaatccgcagcagcctggacgcactccccacccagaccaacaagctatcgctgtgcca
caccccaaagcccagagggggcacaaaacagactccatcgaagactacaaagcatctagc
cgttgcttggctgatgaggactgtaggttggggctgaatccctctcccaccgctagctgc
aagaggctccctagttcagcccggcctgtgtctacagtggaggccaacaaccctctggtc
acccagctgctccaaggcagcctcccgctggagaaagtcctgccgcagacgcactctgct
agcaagctggagatcaaccgcctgccagaggggcttcagtcaggcccccagtcccagctc
agccggcagcagcagaccaggaacccaggcactcgcttcaggggccccccagagtccggt
acgatggagtcgctggttcctgagttgtcctctcagaaccagcagaagtcccctgctggc
cgaggaggctcccctggagcaggcaggagctttgcgtcctctcccccaggcacagtaccc
tcccgcatggcctgcctgctggaggaggcctcctctcgggccacggccatgcagcagtat
ctctcccagcagccagctggtgccgttccccccggggccgtgcccgtcattacttccctc
tcttcttcgtcctcttcctccagacgcaactcccaggagtcggccgtcatcagagagtct
ccggagaggcaccacaacttcacccagccgcgggccaccccggacgccccatcgcccccg
cacagcaacctcggcctctctgacatggtccccaccgtcaagatcaactggcacccttcc
aaaccccaccccccacaccaacagcagctttcgcccgtgaagagcgaggtcacctcccgg
ccctcttgccaaactcttgccaaaacctccccctctggccccatggcaggcggcgggcca
ggtgtggtggtcaccaaaaaggaggcagtgaactctatggacggctacctgactggagga
gggataggaggaggtggggctatggaaggactgctgaacatggagatgtccttagcccgc
atggctaagaaggaggcgcagagcaaagctcagtactcctcatcttccccctcctccctc
cctttccagctctacggaaagctgcctaagcagggtggtgtggcgtcgcccggtttcagc
tacacggccaacgtgtctgtggtggacggcagcggcttctcgaggagcatcgctgacggc
gtcctgcagctgcgtcagcgccacagcgctagccagagcgccacactcagcatccaggcg
ttcgctgacagcgccgctgaggaagtggccctcaagtgttcgtgccgcctcaaggccatg
atcatgtgccagggctgcggggccttctgccacgacgactgcatcggcccctccaaactg
tgtgtctcctgtctggtggtcagatag
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integrated database retrieval system
