Oncorhynchus nerka (sockeye salmon): 115132028
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Entry
115132028 CDS
T07952
Name
(RefSeq) TBC1 domain family member 25-like
KO
K24799
TBC1 domain family member 25
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115132028
Membrane trafficking [BR:
one04131
]
Others
Specific organelles associated proteins
Auto phagosome
115132028
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
115132028
NCBI-ProteinID:
XP_029520072
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Position
LG7:34421067..34441631
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AA seq
859 aa
AA seq
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MTTEEERGVVRVKVKKWEGMLPVELRSFAVDPQITSLEVLQHILIRAFELNGKRNFGIGY
LSQDRGGVEVYLSLLSDWDLEAAFVSAAKPYLQLKMDMNLSEDSPVMEDWDIISPKDVIG
SDQLPGDRRSLAAAVLPFTQSLLSQMMGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHS
YLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGQERMDYMKGKTREYD
QLKGEWSARASPEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHP
QVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGHFMSVKFQHLKLLLQY
SDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELL
GPPLETDQTIVTCESGVEKRPAITGDDGNEGELKEKQRRRHMLRPSREEADGGRKIKMED
RDREDRGARSEGEGNFDMPDVGKEKAHNNMPVPSFEKQTSFGEFKYYSARNKDSFDFEQT
DPPVGPVEMEATSHPWERAPLIKDINKSSSPDTEARSSPNGQIASPVSSFPPGLPNWKNV
SSLSPGSTPSPSSWRGASPDTPSPKFTSPILPNGRMAVPNGTGANSPATPTGRSLVSSPL
LSRALLSSPILSFGRALPSLPVGPVNKSFSSNLQSPCSRAFSTAPHTPNSTNPENTTIKP
CSLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNGFDYNELAMHFDRLVRRHNLGRVLQR
AKALFADYLQSEVWDSEEGDEVSSDSPTTVTAALYSPPPSATRLLFTPLSSPQPSSPNST
YNLADTIPSPSPVSLSPSS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaggaggagaggggcgtagtgcgtgtcaaagtcaagaagtgggaggggatg
ctgccagtggagctccgctcgtttgctgtggatcctcagataacatcactagaggtgcta
cagcacatcctcatccgagcctttgagttaaatggcaaacgcaactttggcataggttac
ctgtcccaggaccgtggaggtgtggaagtgtatctctctctcctttctgactgggattta
gaagctgcttttgtcagtgcagctaaaccttatctacagctcaagatggacatgaatctc
tccgaagacagtcccgttatggaagactgggacataataagccccaaagatgtgattggt
tctgaccagcttcctggggataggaggtcgttggctgctgccgtccttcccttcacacag
tccctgctctcacagatgatgggtcgaacgctgtctagagtacagcaggccttgagctgg
tcgtatggggaggaggtgaagcctttcaagccccctctgagcgatgccgagttccacagt
tacctcaacggccaggggcagctgtcccggccagaggaactgaggctacgtatctatcat
ggtggggtggagccctctctacgcaaggttgtctggcgatacctcctgaacgtgtacccc
gatgggctgaccggtcaggagagaatggactacatgaagggcaagactagggagtatgac
caactgaagggggagtggtcagcgagggccagtccagaggacctggagttcatcaggggc
aacgtactgaaggacgtcctgaggaccgaccgggcccatccctattacgccggctccgag
gacagcccccacctcactgctctcaccgacctgctcaccacctttgccattacacatcca
caggtgtcgtactgccaaggcatgagtgatattgcttctccgatacttgccgtcatggac
aatgaggcacatgcattcatctgtttctgtggcatcatgaaacgcctagagggaaacttc
cgtccggatggccatttcatgtccgtcaagttccagcatctgaagctgctactgcagtac
tcagaccccgagttctactgttatttggtgtcccgtggagctgatgacctcttcttctgt
taccgctggctgctcttggaactcaaacgggagtttgccttcgacgatgccctgaggatg
ctggaggttacctggagctccctgccccctgaccctcccgaaacagaagtggagcttctt
gggccgccgctagaaacagaccaaaccatagtgacatgtgagagtggtgttgaaaagagg
cccgccattacaggggatgatggaaatgaaggggagctgaaagagaagcagcggagacga
cacatgttgaggccctcaagagaggaggcagatggggggagaaagatcaaaatggaggat
agagatagggaggacagaggagccagaagcgagggtgaggggaactttgacatgcctgac
gtgggaaaggagaaggctcacaacaacatgcctgttccttccttcgagaagcagaccagc
tttggcgagttcaaatactacagtgcacggaacaaagacagctttgatttcgagcagaca
gacccaccagtgggtcctgttgagatggaagccacctcacacccatgggagagggcgcct
cttataaaggacattaacaagtcttccagcccagatacagaggcgaggagctccccaaat
ggacaaatagcctctccggtctcctcgtttcctcctggtctgccaaactggaagaatgtt
tcctctctgtctccaggctccactccctccccctcaagttggagaggtgcctccccggac
accccgtcaccaaagttcacctctcccattttacccaacggaaggatggcggtgccgaat
ggaaccggagccaactcacccgctacccccacagggaggtccttagtttcctctccgctg
ttgtctcgagcgttgctctcctcgccaattttgtcctttggaagagctcttccttcgctg
cccgttggaccggtgaacaagtccttttctagtaaccttcaatctccttgcagcagagct
tttagcactgcgcctcacactccaaattcaaccaatccagagaataccaccatcaaacct
tgttccctgccacctcctcaagagtttggcaaaggaaatcctttcatgttgttcctgtgc
ctgtcgatcctgctggagcatcgagaccacattataaagaacggctttgattacaacgag
ctggctatgcactttgaccgccttgttcggcgacacaatctgggcagggtgctgcagcgt
gccaaggccttgtttgcagactacctgcagagtgaggtatgggactcagaggaaggggat
gaggtcagctcggattcgcccaccaccgtcactgctgctctgtattccccgcccccttct
gccaccaggcttctttttacccctttgtcatccccacaaccatcctccccaaactccacc
tataacctggctgacaccataccttccccgtcacctgtctccctctcgccatcctcttga
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