KEGG   Oncorhynchus nerka (sockeye salmon): 115132038
Entry
115132038         CDS       T07952                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10-like isoform X1
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115132038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115132038
   03036 Chromosome and associated proteins [BR:one03036]
    115132038
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115132038
   Coactivators
    SAGA/TFTC/STAGA complex
     115132038
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115132038
    STAGA complex
     115132038
    TFTC complex
     115132038
    SAGA complex
     115132038
    SLIK complex
     115132038
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 115132038
NCBI-ProteinID: XP_029520090
LinkDB
Position
LG7:34779120..34781070
AA seq 187 aa
MNVDTPQPVIPGGSSSISSTSSNCVTNNNAATNVSSIPSVSISNAPTSATMATPSSDTSV
SNGVYVPSGIANGDVKPVISTTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRII
RLVSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKQDKKYTLTMEDLSPALSEYGINV
KKPHYFT
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaacgttgatactccacagccagtcataccagggggctcttcttcaatttcctcgaca
tccagtaattgcgtcactaacaacaatgcagcaactaatgtcagcagtatcccctcggtt
tccataagtaatgccccaacctcggctaccatggccacaccatcatctgacacatccgtg
tccaacggtgtctatgttcccagtggcattgccaacggcgatgtgaagcctgtaatctcc
accacaccactggctgactttctcatgcaattggaggactacactcctacaatccctgat
gcagtgacaggctactatctcaaccgggctggctttgaggcgtctgatccacgaataatc
cgtttggtctccctagcagctcagaaattcatctcagacattgctaacgatgctctgcag
cattgtaaaatgaagggcacggcctctgggagctccaggaacaagacaaagcaggacaag
aagtacacattgaccatggaggacctctcccctgccctgtctgagtatggcatcaacgta
aagaaacctcattacttcacatag

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