Oncorhynchus nerka (sockeye salmon): 115132040
Help
Entry
115132040 CDS
T07952
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115132040 (arhgef16)
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115132040 (arhgef16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SOS1_NGEF_PH
PH
SH3_2
RHG20_PH
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
115132040
NCBI-ProteinID:
XP_029520095
LinkDB
All DBs
Position
LG7:complement(34829139..34864260)
Genome browser
AA seq
700 aa
AA seq
DB search
MSNRQSDGSMGDQTSLLLEQRFSSDLQLDCDSLDNHHGQPQGSPTSQAEPPLADGSMGRK
PVVLSTQSVAARKLGTQQLIPKSLAVTSRPSKPRHHTTVVTFPLGLEADSTTSSSRSRHS
AMEPDASWEDYDSDGNGFASRRNRRNQSYRVAVTSPDMEAIAVNNWGANTLMPVKEDSRA
SSPGPAHLPGRKRTLGRKRNQRHGGSFKDDPRLYQEITERGLQPTTIADDDDFVHVEPPG
EDQAIVVKSYRPAQVTWSSLQQVKDNDILQMISAEERKRQEAIFEIITSEFSYLHSLGIL
VRHFKGSEALRKTITATEHHHLFSNIAVIEGVSKRFFDDLERRHHDNVVIRDISDIVQNH
AAHHFEPYIVYCSNETFQQRTLQKLLTSNTAFKEVLKRIEGSGESQGLPMISFLILPMQR
VTRLPLLLDTICQKTPDTTAEHFAAVWALKAISKLVNSCNNGARRMERTEQMYTIQKQME
FGKIKPFPLVSSSRWLQKRGELAVCTEELSIFWKAFSHRSYYLFLFNDVLIVTKKKSEES
YVVMDYATLVNVEVESAEELEGRTSPPAKGGSAHLSLRLLMSRNSEGRPEEIALVAESRV
DRARWVSALREHKQNRTSADGLPQYEATKAYMPKEPDELGLQQAEVVILLQKEEDWCHGE
RMRDGERGWFPASCATEITNRIAMENNVQRMKRLRKETNV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagacaatcagacgggtccatgggcgaccagacctccctcctgctggagcaa
cgcttctcttccgacctgcagctggactgtgactcactggacaaccaccatggccaaccg
cagggctcgcccacgtcccaggccgagcccccattggccgacggctctatggggcggaag
ccggtggtcctgagcactcagagtgtggcggcgcggaagctgggcacccagcagctaatc
cccaagagtctggcggtgaccagtcggcccagtaagccccgccaccacaccaccgtggtc
accttccccttgggtctggaggccgactccaccacctcctcctccaggagccgtcactct
gccatggagcctgatgcatcctgggaagactacgacagtgacgggaatggcttcgcatcg
aggaggaaccgcaggaaccagtcataccgggtggcggtgaccagccctgacatggaagcc
attgctgtgaacaactggggcgcgaacacgctcatgcctgtaaaggaggacagcagagcc
tccagcccagggccggcacaccttcccggacgcaagagaaccttggggagaaagaggaac
cagaggcacgggggctcattcaaagacgatcctcggctgtaccaggagatcacggagcgg
gggctgcagcccaccactattgcggatgatgatgactttgtccacgtggagccacctggg
gaggaccaggccatcgtggtaaagagctacaggccagcgcaggtcacctggagctcgcta
cagcaggtgaaggataacgacattcttcagatgatctctgctgaggagcggaagcgacag
gaggccatatttgagatcatcacctcagagttctcgtacctccacagccttggcatcctg
gtgaggcacttcaaagggagcgaggcactgcggaagaccataactgccaccgagcaccac
catctcttctccaacatcgctgtcatcgaaggtgtcagcaaaaggtttttcgacgacctt
gaaaggcgtcaccatgacaacgtggtgatccgggacatcagcgacatagtgcagaaccac
gccgcccaccactttgagccctacatagtgtactgctccaacgagaccttccagcagagg
acgctgcagaagctgctaacgagcaacactgcttttaaggaggtgctgaaacggattgag
gggagtggcgagtcccaaggtctgcccatgatctccttcctcatccttccaatgcagaga
gtcacccggctgccgctgctattagatacgatctgtcagaaaactccagacacaacggcg
gagcactttgctgcagtgtgggccctgaaggccatcagtaagttggtgaatagctgcaat
aacggagcaaggcgaatggagaggacggaacagatgtacactattcagaagcagatggag
tttggcaagatcaagcctttcccactggtgtcgtcatcacggtggctgcagaagcgcggg
gagctcgccgtctgcactgaggagctcagtatcttctggaaggccttcagccacaggagc
tactacctgttcctcttcaacgacgtgctcatcgtcaccaaaaagaagagtgaagagagc
tatgtggtgatggactatgccacgctggtgaatgtggaggtggaatcggcggaggagctg
gagggacggacatcaccacctgccaagggaggctccgcccacctgtctctgcgactgctg
atgtcaaggaacagcgaggggagaccggaggagattgctctggtcgctgagtccagggtc
gaccgcgctcgttgggtaagtgctcttcgggagcacaagcagaacaggaccagtgcagac
ggcctgccgcagtacgaggccaccaaagcctacatgcccaaggagccagacgagctaggc
ctgcagcaagcagaggtagtcatcctcctgcagaaagaagaggactggtgccatggggag
aggatgagggatggagagagaggctggtttcctgccagttgtgccacggagatcaccaac
cgcattgccatggagaacaatgtacagcgtatgaagcgtctgcgcaaggagaccaacgtt
tag
DBGET
integrated database retrieval system
