KEGG   Oncorhynchus nerka (sockeye salmon): 115132054
Entry
115132054         CDS       T07952                                 
Symbol
plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one00310  Lysine degradation
one01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:one00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    115132054 (plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115132054 (plod1)
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     115132054 (plod1)
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115132054 (plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 115132054
NCBI-ProteinID: XP_029520129
LinkDB
Position
LG7:complement(35639212..35654939)
AA seq 732 aa
MRAFSLLILAWMSLLVVLPVIRCKEQRELSEGNLLVVTVATKETDGFRRFMRSARHFNYT
IKVLGRGEPWKGGDYMTEPGGGQKVRLLKAGLQEMEEDKVVLFIDSYDVVFASGPKELLK
KFQQTRHKVVFSAETLIWPDRHLEDKHPHFREGKRFLGSGGFIGYVPNLKEMVADWTGED
SDSDQLFFTKIYINPEKRKSINITLDNRCRMFHNLHGSLDEVVLKFEDGQVRARNVLYDT
LPVVIHGNGPTKLQINYLSNYIPTVWTFETGCSVCLEDLRPLSGLKESEYPLVVIGIFIQ
QPTPFVSVFFETLLKLEYPKNRLKLFIYNQEQHHEVAVSSFLKDHGKEYQDVKVIGPEEN
MDRVASRNLGLDMCRQDKDCEYFFSMDIEVVLKNKDTLKILIEQNEPIIAPMITREGRLW
TNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYLTKVYLVKASLLHEELSNNDLFSSG
TLDLDMAFCHNARNKGVFMYVTNMHTFGRMLSTENYQMSHLHNDLWQIFENPKDWEERYI
HENYTKIMRDKLIETPCPDVYWFPLFSDIGCDHIVQEMENFGQWSGGRNTDTRIQGGYEN
VPTIDIHMTQINYEKEWQKLLLDYIAPITETMYPGYYTKCISYLNFVVRYKPDEQPLLTP
HHDASTFTINVALNSKEIDYEGGGCRFIRYNCSVEAPRKGWALMHPGRLTHYHEGLRTTA
GTRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagagctttttccttattaatattggcctggatgtccttgcttgtggttttaccagtg
atacgttgtaaagaacagcgagaactatccgaaggcaaccttttagttgtgactgttgcg
accaaagagacagatggcttcaggcgtttcatgcggtctgcccgacactttaactacact
atcaaggtgcttggcagaggggagccatggaaaggtggggactatatgaccgagccagga
gggggtcagaaagtgcgccttcttaaagctggtttgcaggagatggaggaagacaaggtt
gtcctcttcattgacagctatgatgttgtcttcgcctccggtcccaaagagctgctgaag
aagttccagcagacaagacacaaggtggtcttctctgcagagaccctcatctggcccgac
agacacttggaggacaagcacccccacttccgagagggaaagaggttcttgggctcaggg
ggattcattggctatgttcctaacctcaaagagatggttgctgactggacaggggaggac
agtgacagtgatcaacttttcttcaccaagatttatatcaacccagagaaaagaaaatcc
atcaatataacactggacaacagatgccgaatgtttcataatcttcatggatcccttgat
gaggtggtgttgaagtttgaggacgggcaagtgcgggccagaaatgtgttgtatgataca
ttacccgtcgttattcatggcaacgggcccaccaagctccagatcaactacttgagcaac
tacatccccacagtgtggacgtttgagacgggatgcagtgtgtgtcttgaggacctgcgg
ccactctcaggactcaaggagagcgaatacccactggtggttattggaatcttcatccag
cagcccaccccctttgtcagtgtgttctttgagaccttgctcaaactggaatacccaaag
aaccgactcaaactcttcatctacaaccaggagcagcaccacgaggtagcggtcagctct
ttcctgaaggaccatgggaaagagtaccaggatgtaaaggtcatcgggcctgaggagaac
atggacagggtggcttcccgcaacctcggccttgatatgtgtcgacaggacaaggactgt
gagtatttcttcagcatggatatcgaagtggttctgaagaacaaggacaccctaaagatt
ctcatcgagcaaaatgagcctataattgcacccatgataacccgagaaggccgcctgtgg
accaacttctggggagcactcagtgctgatggttactacgctaggtcggaggactatgtg
gacattgtgcaaggacgcagagttggtgtgtggaatgtcccctacctgaccaaggtgtac
ctggtgaaggccagcctccttcacgaggagctctccaacaacgacctcttcagctcgggc
actctggacctcgacatggccttctgtcacaacgccagaaacaaaggagtcttcatgtat
gttacgaatatgcacacctttgggcggatgctgtcgacagaaaactaccagatgagccat
ctccacaacgatttgtggcagatctttgaaaaccctaaggattgggaggagcgttacatc
catgagaactacacaaagataatgagagacaaactgattgaaacaccttgccctgatgta
tactggttcccgctattctctgatatcggatgtgaccacattgttcaagaaatggaaaac
tttggacagtggtcaggtggccgaaatacggacacaaggatccagggtggctatgagaat
gtccccaccattgatatccacatgactcaaatcaattatgagaaagagtggcagaagctt
ctgttggattacatagccccaatcacagagacaatgtatcctggatactacaccaagtgt
atctcttacctcaacttcgtagtgaggtacaaacctgacgagcagcccctgctcaccccg
caccacgatgcatctactttcactattaatgtagctctcaacagcaaagaaattgactat
gagggtgggggatgcaggttcatacggtataactgctccgtcgaggcaccccgcaaaggc
tgggccctcatgcaccctggacggctcacccactatcacgagggcctgcgaaccactgca
ggcactcgatacatcgcagtgtcatttgtggacccctga

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