Oncorhynchus nerka (sockeye salmon): 115132069
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Entry
115132069 CDS
T07952
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115132069 (rtel1)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115132069 (rtel1)
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115132069 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
115132069
NCBI-ProteinID:
XP_029520158
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All DBs
Position
LG7:complement(36718412..36776103)
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AA seq
1209 aa
AA seq
DB search
MPPLTLKGINVDFPFTPYECQKDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCATLAWK
DYFKDTISARKIAEKMGGAELFPNTPLASWGTAATDGDTTTYYTDIPKIIYASRTHSQLT
QVINELKNTSYRPKVCVLGSREQLCINPEVMRQESNHLKVHMCRQKISTRSCVFYNNVEE
KSMDKDLVNSILDVEDLVKAGNKQRVCPYYLSRSLKQQAEIIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLASAIDAVDKLLAEQAKEAGRGDVSEDFN
MESINGGLKLDITTIAKIKQILLDLEAAIDSYDVPDKGITKPGSFIYELFQTAHLTFDTR
TPIFEALEQITGYLAGKPGIFMNTTGLQKLADIIQLVFCVDTQEGNKGANMPLNMQSSTT
KFKVHIHKDTSYHKKKQNTDVWSSSSSKKQGNVLSYWCFSPGFSMQELVRQGVRSIILTS
GTLSPLSSFTSEMQIPFPVCLENPHVIQHDQIFVSIIDRGPDSVQLSSAFDRRFVPENMA
SLGNTVVNLGRVVPHGLLVFFPSYPVMDKTLEFWRANGHADRIENIKPMFVEPKGKGTFT
EIIDGYYDKVNDSKSKGGSFFAVCRGKASEGLDFADTYGRGVIITGLPFPPRMDPRVILK
MQYLDEMCRKKTPGVQYLSGQNWYRQQASRAVNQAIGRVIRHRDDYGAIFLCDHRFKSTD
ARAQLPSWIRPYVRTYDNFGNVVRDVAQFFRVAQKHRPPPEKKPAKGSCGGAVHSADAQC
VSAGPCHSSESSTNGGFAQKAKVLDSHVPSLKRRRLNEHGGSEGNGMARLCIEYETEMEA
SRRRPAGLLDALEHSDSRYGDEVEALGGEERANRISTLSLQYDKRVDDELRGGKRKIKVV
QERKIPLSPNVSEEGKAGKAKSFLVEMKKSLSQVNFQRIMAALQTYKQKDDLDELLAEAA
DLFTGDTNTYNLLRGFYQFIRPHHKKRFDEKCVELTGQGCGYKPDHSLSKEEKETLMQNG
AKPGKLTSVAVASDSSSSCSQLNASLLLNKGGHHLGIHGLTTEEHLPKNKVLTVDDPKCE
GQAPVQSAQKSQIYASFIADVKKSIGLEKSNQLFSAIQSYKKTDNYDSLVGTVVSLLTEK
NEDFNLLSTFALFIRPHHKKQYKEMLDALIGDSTGSSASSGISGQLIKVSTPGKAQRKIS
SFFPSSQRK
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctgactttgaaagggataaatgtggatttccctttcaccccatacgaatgt
cagaaggattatatgagcaaggtgattgagtgtctacaaaacaaggtaaatggggttctg
gagagtccgacaggcacgggcaaaaccctatgccttctgtgtgccacccttgcctggaag
gactacttcaaagacaccatttctgccaggaagatagcagaaaaaatgggaggagcagag
cttttccccaacacaccattggcatcgtgggggaccgctgcaacagatggagacacaaca
acttattatactgatattccaaagatcatttatgcatccaggacacattctcagctgacc
caggtcattaatgagttaaagaacacttcctacaggcccaaagtgtgcgtgttaggatcc
agggagcagctttgtattaacccggaggtgatgcgtcaggagagcaaccaccttaaggtt
cacatgtgtaggcaaaagatatccaccaggtcttgcgtcttctacaacaatgttgaagag
aagagcatggataaagacctggtgaactccattttggatgttgaagatctggtgaaagct
ggcaacaagcaaagggtctgcccatactacctctcacgttccttgaaacagcaggcagaa
atcatattcatgccttacaactatctcctggacccaaagagtcgcagggcgcacaacatc
gagttgaaaggggcagtggtcatttttgacgaagcgcataacgtggaaaagatgtgtgag
gagtccacatcctttgacctcacgccctacgacctggcatcagctatcgatgctgtggac
aagctgctagcggagcaggccaaagaggccgggcgaggagacgtctcagaggacttcaat
atggaatccataaatgggggtttgaaattggacataaccaccattgctaaaataaaacag
atacttctggatctggaggcggccattgattcttacgacgtgccggacaaggggatcacc
aaacctggaagcttcatctacgagttgttccagacggctcacctcacatttgacacaagg
acgcccatctttgaagccctggagcagatcactggatatctggctggaaaaccaggcata
ttcatgaacacaactggattacagaaattggcggacataattcagctggtgttctgcgtt
gatacacaagagggcaacaaaggtgcaaacatgccgctcaacatgcaatccagcaccact
aaatttaaggtccatatccataaagacaccagctatcataagaaaaaacaaaatactgat
gtgtggtcttcatcttcctccaaaaaacaaggaaatgttctgagttactggtgcttctcg
cctgggttcagcatgcaggagctggtgaggcagggcgtgcgcagcatcatcctcaccagc
gggaccctctcccctctgtcctcgttcacctccgaaatgcaaattccctttccagtatgc
ctggagaacccccatgtgattcagcatgatcagatctttgtcagcataattgaccgcggt
ccagacagcgtgcagctcagctcagcatttgaccgcaggtttgtccctgaaaacatggca
tctttagggaacactgttgtgaatctgggccgcgttgtccctcacggtttgctggtgttc
ttcccctcttaccctgtgatggacaagactctggagttctggagggcaaacgggcatgcc
gaccgcattgaaaacataaagcccatgtttgtggagcccaagggaaaggggacgttcacg
gagataattgatggttattatgacaaagtcaatgactcaaaatctaaagggggcagcttc
tttgcggtctgtcggggaaaggccagcgagggcctggattttgctgacacgtatggccga
ggggtcataatcactggtctcccgttcccgccccgcatggacccccgggtcattctgaag
atgcagtacctggacgagatgtgcaggaagaagacccccggggtgcagtacctgtcgggg
cagaactggtatagacagcaggcgtccagggcagtgaaccaagctattggaagagtcatt
cgccaccgtgatgactacggggctatcttcttgtgcgaccacaggttcaaaagcacagac
gcacgtgcccagctaccctcatggataaggccctacgtgcgcacttacgacaactttgga
aatgtggtccgtgacgtggcgcagttcttcagagttgcacagaaacataggcctcctcca
gagaagaagcctgcaaaggggagttgtggtggggcggtacactctgcagatgcccagtgt
gtcagcgccggaccctgccactcctccgagagctccaccaatggaggtttcgcccagaag
gccaaagtactggactcccacgtgcccagtctgaagaggcgacggctgaatgagcatggc
ggcagtgaggggaacggcatggctaggctgtgcatcgaatacgaaacggagatggaggcg
agccggaggaggccggccggcctgctagacgccctggagcacagcgacagccgctatgga
gatgaagtcgaggccctagggggcgaggagagggctaatcgcatatccacgctgtctctt
cagtacgacaagcgcgtggatgacgaattgcgtggtggaaaacgaaaaatcaaagtggtc
caagaacggaaaatccctctgtctcctaatgtgtcagaggagggcaaagcggggaaagcc
aagtcgttcctggtggaaatgaaaaagtcgctgagtcaggtgaatttccagcgaataatg
gcggccctgcagacgtacaaacagaaggatgaccttgacgaactgctggccgaggcagcc
gacctcttcaccggggacaccaacacctacaacctgctccgaggattctaccagttcata
cgaccccaccacaagaagagatttgatgagaagtgtgtggagctgactggccagggctgt
ggctacaaacccgatcactcgctctccaaggaggagaaagaaacgctgatgcagaacggg
gccaagccgggaaagctgacgagtgttgcagttgcttctgattcaagctcctcctgcagt
cagctcaacgccagtctgctgcttaataaaggtggccatcaccttggaatccacggattg
actacagaggagcatttgccaaagaataaagtgcttacagttgatgatcctaaatgcgaa
ggccaagcaccagtccagtctgctcagaagagtcaaatctacgccagtttcatagcggat
gtgaaaaaatccattggacttgagaagtccaaccaactgttctcagctattcagagctat
aagaagaccgacaactatgatagcttggtgggcacagtagtgagtttgttaactgagaaa
aacgaagactttaacctccttagcacatttgccctgttcattcggcctcaccataagaaa
cagtacaaagagatgctggatgccttgataggtgactccacaggctcaagtgcttcctct
gggatttcaggccaactaataaaagtttcaacgcctgggaaagcacaaaggaagatctcc
tctttctttcccagcagccaaaggaaatga
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integrated database retrieval system
