Oncorhynchus nerka (sockeye salmon): 115132127
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Entry
115132127 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U-like
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115132127
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115132127
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115132127
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115132127
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Type II RPTP family
115132127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Pur_ac_phosph_N
Tc-R-P
Y_phosphatase3
PTPlike_phytase
FN3_DSCAM-DSCAML_C
SPG48
Motif
Other DBs
NCBI-GeneID:
115132127
NCBI-ProteinID:
XP_029520252
LinkDB
All DBs
Position
LG7:10127701..10436648
Genome browser
AA seq
1341 aa
AA seq
DB search
MYTGVFLLMLVVGLYADTMDQGPTAGCTFDEDSDPGLCEYKQGQEDDFDWQLMRTYNWPH
STADLLRGSFMMVNSSQHAVGQRAHLLLRSLSENDTHCIQFSYFLYSRDGHSPGDLQLYI
RVNGGPRGSPVWNVSGSHGRQWHQVELAVSTFWPSEYQVVFEASVSAERRGYIAIDDILL
LNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGKTTETEPFLLERRNGLVVAASSIQRLS
HKRLMATFQVAAERGEQDLYRCVTESTRGAAVSNFAELIVRVSPTPIAPPQLLRAGPTYL
IIQLNTNSIVGDGPVIRREIEYRASQSPWSETHGVGSLTYKVWHLEPDTEYRISVLLTRP
GEGGTGAPGPPLVSRTKCAEPMRALRGLTATEIQPRQLTLQWEPLGYNLTRCHTYSVSLC
YRYSTPAGGSAGNNATVRECLSVERNQSHFTLRDLPPFRSVHVRLALDNPEGKKESREVT
FQTEEDIPGGVAPESLTFTPLDDMIFLKWEEPVEPNGVITQYEISYQGIESSDPGINVPG
PRRTVSKLRNETYHMFSGLHPGTTYLVSVRARTAKGFGQTALTEITTNISAPVFDYEDVP
APLSESESTITVLLRPALGRGAPVSAYQVVVVEEDGSRRVRRSRRRRRELGSGSDCFPVP
ASQVEAQSKSHYYTAELPPSSLPEATPFTVGDNHTYNGYWNTPLDPSKNYLVFFQAISNF
RGETRMNCIRIARKGACKDHKRTLEVSQHAEDMGLILGACAGGMVVLILLLGAIVIVVKK
GRDFYSYSYYPYGFKQEYESFFDGWDVTKKKDKTKGRHDSLLGHDRHRVKLHSLLADPNS
DYVNANYIDIRINREGYQRSNHFIATQGPKQEMIYDFWRMVWQENCFSIVMITKLVEVGR
MKCCKYWPEDSELYGDIKITLLKTETLAEYTVRTFAMERRGYPAKHEVCQFHFTSWPEHG
VPYHATGLLAFLRRVKASTPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYN
CVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETAIPVMEFALTYKEMLRVDSQSNTSQ
LREEFQTLNSVTPHLDVEECSVSLLPRNREKNRSMDVLPPDRALAFLVTTEGVAEGNSYI
NAALTDSFHRPAAFVVTPHPLPGTTADFWRLVYDYGCTSVVMLNQINQSNSAWVRRGEWL
MDERHQIRLFRVQNIMRLQEGQLVVRHFQFLRWSPYRDVPDSKKAFLSLLAQVHNWQREC
GEGRTIVHCLNGGGRSGTFCACTMLLEMIRHHSLVDVFYAAKTLRNSKPNMVETMEQYRF
CYDLALEYLDALDCLSEIEVR
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtataccggagtgtttctactgatgctggtcgtcgggctctacgctgatactatggac
caagggccaacagctggctgtacctttgacgaagactctgaccctggactgtgtgagtac
aagcagggacaggaggacgactttgactggcagctgatgaggacatacaactggccacac
agcaccgcagacctgctacgagggtcgttcatgatggtgaactcgtcccagcatgccgtg
gggcagcgggcccaccttctcctccgttcgctgagtgagaacgacacgcactgcatccaa
ttcagctacttcctgtacagccgcgacggccattcccccggggacctgcagctctacatc
cgggtcaacggggggccacggggaagccccgtctggaacgtctccgggtcacatggacgc
cagtggcaccaggtggagctagccgtcagcacattctggcccagcgaataccaggtggtg
tttgaagcatccgtctcagcagaacggcgaggctacattgccattgatgacatcctgctg
ctcaactacccctgctacaaggttccccacttctctcggctgggggatgtggaggtcaat
gcagggcagaatgccaccttccagtgtgtcgccacgggcaaaactacagagacagaaccc
ttcctactggagcgtcgtaacggtttggttgtggctgcgtcctctatccagcgtctgagc
cacaagcgtctgatggccaccttccaggtggcggctgagagaggggagcaggacctgtat
cgctgcgtcacagagtccacccgcggagctgctgtgtctaactttgccgagctcatcgtc
agagtgtcccccacccccatcgctccaccccagctgctccgggctggccccacctacctg
atcatccaactcaacacaaactccatcgtgggggacggccccgtgatccgtcgcgagatc
gagtaccgcgccagccaatcaccatggtcggagacacatggcgtgggctcgctcacttat
aaggtgtggcatctggagccggacacagagtaccgtatcagtgttttactgacccggcca
ggggagggaggcacaggggcgcctggaccccccctggtcagcaggaccaagtgtgcagag
cccatgcgtgcgttgcgaggcctcacagcgacagagattcagcctcgtcaactaacctta
cagtgggaacctctgggctacaacctgacgcgctgccatacctactcggtctctctctgc
taccgctactccacgcctgcagggggcagcgcagggaacaacgccacagtgagggagtgt
ctctctgtggagaggaaccaatcacacttcaccctgagggacctgcccccgttccgatcc
gtccacgtccgactggctctggacaacccagaaggcaagaaggagagcagagaggtcacc
tttcaaactgaggaggacattcctggtggcgttgccccagagtcactgaccttcactcca
ttggacgatatgatctttctgaaatgggaggagcctgtggagcccaatggggtaatcaca
cagtatgagatcagttatcagggcatcgagtcatctgacccaggtatcaacgtaccaggc
cctcgccgtaccgtttccaaactgaggaacgaaacataccacatgttctctggcctacac
cccggcaccacctacctggtgtctgttagagctcgcaccgccaagggcttcggacagacc
gccctcactgagatcaccaccaacatctccgccccagtgtttgactatgaggatgtccca
gccccactcagtgagtcagagagcaccatcacggtgctgttgagaccagcgctgggcaga
ggagcaccagtcagtgcgtaccaggtggtggtagtagaagaagacggttccaggcgggtc
aggaggagcaggaggaggaggagggagctgggtagcgggtcagactgtttccctgtgcca
gcgtctcaggtggaggctcagtctaagtcccactactacacagctgagcttcccccctcc
agtctccctgaggccactccgttcaccgtaggggacaaccacacctataacggctactgg
aacactcccctggacccctccaagaactacctggtcttcttccaggctataagcaacttc
agaggggagacgagaatgaactgcatccggattgcccgtaaaggtgcctgtaaggaccat
aagaggaccctggaggtgtcccaacatgcagaggacatgggtctgatcttgggggcctgt
gctgggggaatggtggtccttattctgctgctgggggccatcgtcatcgtcgtcaagaag
ggaagggacttctattcttactcttactacccatacggattcaaacaggagtatgagagc
ttctttgatggatgggatgtcaccaagaagaaggacaagactaaagggagacatgacagt
ttgctggggcatgatcgtcatcgagtcaagctgcactcccttctagcagaccccaactct
gactatgtcaatgccaactacatagacatccggataaacagggaagggtaccagcgatca
aaccacttcatagccacccaaggtcccaagcaggagatgatctacgacttctggaggatg
gtgtggcaggagaactgcttcagtattgtcatgatcactaaactggtcgaagtgggcagg
atgaagtgctgtaagtactggcccgaggacagtgaactctatggagacatcaagatcaca
ctgctgaaaacggaaacactggccgagtacaccgtccgcacctttgctatggagcggagg
ggctacccagccaaacacgaggtgtgtcagttccacttcacctcctggccagagcatggt
gttccctaccacgccacaggcctgctggccttcctacgccgggtcaaggcttccacaccc
cccgacgctgggcccgtggttgtccactgcagtatgggagcaggcagaacaggctgctac
atcgtactggacgtcatgctggatatggcagagtgtgagggagtggtggacatctacaac
tgtgtcaagaccctctgctccagacgcatcaacatgatacagacagaggagcagtatgtg
ttcatccacgatgccattctggaggcctgtctgtgtggagagacagctataccagttatg
gagtttgctctgacctataaggagatgctgagggttgactcacagagcaacacctcccag
ctacgagaggagttccagactttgaactctgtgacccctcacctggacgtggaggagtgc
agcgtgtccctgctgcctaggaaccgtgagaagaaccgtagcatggacgtcctgcctccc
gaccgcgccctggccttcctggttaccaccgagggcgttgccgaggggaacagctacatc
aacgctgctctcaccgacagctttcaccgacctgccgccttcgtggtgacgccacacccg
ttaccgggaaccacggcagacttctggaggctggtctatgactatggatgtacctcagtg
gtgatgctcaaccagatcaaccagtccaactctgcctgggtgagaagaggggagtggctg
atggatgaacgtcatcaaatccgtctgttccgggttcagaacatcatgcggctccaggaa
ggtcagctggtggttcgtcatttccagttcctgcgctggtctccataccgtgacgtgcca
gactctaagaaggctttcctcagcctcctggcccaggtccacaactggcagagggagtgt
ggagagggacgtaccatcgtccactgtctaaacggtggaggtaggagcggtacattctgt
gcttgtaccatgctgctagagatgatccgtcatcacagcctggtggatgtcttctacgct
gccaagacgctacgcaactccaaacccaacatggtggagaccatggagcagtaccggttc
tgctatgacctggccttggagtacctggacgccttggactgcctgagtgagatagaagtg
agataa
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