Oncorhynchus nerka (sockeye salmon): 115132148
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Entry
115132148 CDS
T07952
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115132148
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115132148
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
PcfK
DUF2573
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
115132148
NCBI-ProteinID:
XP_029520291
EnsemblRapid:
ENSONEG00000002327
LinkDB
All DBs
Position
LG7:40097867..40161993
Genome browser
AA seq
1850 aa
AA seq
DB search
MAFCQIRLTSAMAAYLGIFILALSVVGQQLPSSPHGCMEGSCYPATGNLLIGRGVNLSAT
STCGLHGPEHYCIVSHLQELDKCFACNSQRPYDPYYHKNSHRVENVIQLKDSNEDLTWWQ
SVNGEEGVSIRLNLEAEFHFTHLIMKFKTFRPAAMLIERSADFGRSWRPYRYFAYNCTKT
FPRVPGHALHYINDVICEERYSDIEPSTKGEVIYKVLDPAIHVKDPYSLEIQELLRITNL
RINFTKLHTLGDNLLDRRSDVLQKYYYSLYELVVRGSCFCYGHASECAPVPGVDARDSGM
IHGRCVCKHNTEGLNCERCRDFHNDLAWSPAEANDPHTCRECNCNGHSNHCHFDMAVYLA
TGNAGGGVCDHCLHNTMGRNCEMCKPFYYKDPSRDIRDPAACTACDCDPVGSMEGGVCDS
HTDLDMGMIAGQCRCKLNVKATRCDYCKEGYYGLAHNDPQGCQPCNCDPRGTIMLGAPCD
QISGDCSCKRYVTGRYCNQCLPEYWGLGNDLAGCRACDCDFGGAYSNRCMVENGQCDCRR
HLIGRQCSDVQPGYFCAPLDYYKYEAEDAVGHSPSDHNLPGKARPQAEVDCVEHLNNQLR
RHRRHRRIATTQQQRAALRRIRQLQQTPDVRSVHRERSQGHMVTWTGPGFARVKDGAGLV
FTIDNIPHAMEYDIMIRYEPESTEDWEAIVSVTSLLLPTSSRCGNLLPTEQLYTVTLPHN
RRYVQMPRPFCFEPSNRYVVAIRFQRHGVSQRHLTAFILVDSLVLIPKYTELLGFQGNDP
AAEERRDEMVRYMCLDSFMAMPMPMLAEMCTKLICSISAILHDGALQCQCDPQGSLSAEC
DRVGGQCRCKPNVIGQRCDQCAPGTYGFGPYGCTACDCHSQGSLGHQCDPVTGQCPCRQG
ASGRQCSDCQPGQWGFPSCRPCQCNGHTDDCNPQTGECQTCRDYTDGQYCERCVNGFFGN
PVLGSGDHCRPCPCPGNPGSGHSNGDSCHTDISSNQILCNCKQGYTGPRCERCAPGYYGN
IEHPGGQCLPCQCSGNIDTQDPESCDPRTGQCLRCLYNTDGASCSDCKPGYYGNALAQDC
RRCTCVTAGTQQSYCTDGHCHCDRQTGACPCRDNVVGHNCDQCAPDYWNYGTDRGCERCG
CHPLHAMGSHCNMFSGQCHCQQGFGGRQCTECEQFHWGDPRVQCEECNCHPLGSEMAQCD
RVTGVCECREGAVGRRCDECARGFTGVFPKCVRCHPCFELWDDAVCMIRRNLDHIRYDIQ
RILESGETPGVGDKRILELENNLAQVQDLIRDGDWDRLHQLIGQSIDDLRAEIALTDGRL
MGVARELNGTAVQDEVLRRNLTQMERELRDLNTTLMHHLQKQENNLSSGFQDQFDNVKKY
YSESQKAQQKCNASVSGPFSPVEESKATRAHTEDLLNKRQDKFLRMVAAQKKSLSELQNK
AQDVDKKVHHLSHKVCGGHSNASSNGTCHDSPCGGAGCRDNDGRRVCGGDGCDGTVSASL
KGLKHANDVSDNLTAASEDLQGMAKKLQDIAMLTQDVKNQAMDTLDKAQKKKDLFENSNK
KLKEFIQKIKDFLTEEGADPESIEKVAQQVLAISLPVNRTTLDSMVQQIKDNINNLTDVE
GVFNHTSQQLHQAKELLNRAKDAKTRAEGVKDTANTTKQALDASEKAIQKATKALDHALN
NLNSTRNTTATVEENLLDLEVKQMDAMMRLANLSMGVEALKTKTDQNREMAKDAKNQAEN
ATNAASGLEQRLNETEDRYKELQMKVDSLGGASGGLGNVNQRAKEIKKEAEDLLTKANKG
IETLRKLEKKFRNNEQKMLDQQSELGELERNATEAREAIRKQVQTYNNCN
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggccttctgtcaaattcgactgacatccgccatggctgcatatctgggcatatttatt
ttagctctgagtgttgtgggacagcagctcccctccagcccgcatggctgcatggagggc
agctgttacccggcaacaggcaacctgttgattggccgaggcgttaatctcagcgccacc
tccacttgtggtcttcatgggcctgaacactactgcatagtcagccacctgcaggaattg
gacaagtgttttgcgtgtaactctcagcgaccttatgacccgtactaccacaaaaacagt
caccgcgtggagaacgtcatccaactcaaggacagcaacgaagacctcacatggtggcag
tccgtcaacggagaggagggtgtcagtatcagactcaatctggaggcagaattccacttc
actcacctcatcatgaagtttaagacattccgaccggcagccatgctgatcgagcgttcg
gctgattttggtcgctcctggagaccgtaccgttattttgcctacaactgcaccaagacg
ttcccacgcgtgcccggccacgccctccactacatcaatgatgtgatctgtgaggagaga
tactctgacatcgagccctccacgaaaggagaggtcatttataaagtcctcgaccctgcc
atacatgtgaaagacccatacagtctggagattcaagagctgttgcggatcaccaacctg
cggatcaacttcaccaagctgcacaccctgggagataacctgctggaccggcgctctgac
gttctgcagaagtactactactccctgtatgagctggtggtgaggggcagctgcttctgc
tacggacacgcctcagagtgtgcccccgtgccaggggttgatgccagggacagtggcatg
atccatgggcgatgtgtgtgtaaacacaacactgaggggttaaactgtgaacgctgcaga
gacttccacaacgacctggcctggagcccagctgaggccaacgaccctcacacatgtaga
gaatgcaactgtaacggccactccaaccactgtcactttgacatggcggtttacttggcc
acgggcaatgccggcggtggcgtctgtgaccactgtctccacaacaccatgggacgcaac
tgtgagatgtgtaaaccattttactacaaggaccccagcagggacatcagagaccccgcc
gcttgtactgcgtgtgactgtgatcctgtgggctccatggagggaggtgtgtgtgacagc
cacacagacctggacatgggcatgatcgccgggcagtgccgctgtaagctcaacgttaag
gccacccgctgtgactactgcaaggagggttactatggcctggcccacaacgacccacag
ggctgccaaccgtgtaactgtgaccctcgtgggaccataatgctgggagcaccatgtgac
cagatcagtggggactgctcctgtaagagatacgtcacaggccgatactgcaaccagtgt
ctgccggagtactggggtcttggtaatgacctagcaggctgccgagcctgtgactgtgac
tttggtggagcctacagcaacaggtgtatggttgaaaatggccagtgtgactgtaggagg
cacctgattggtcgtcagtgctctgacgtgcagcctgggtacttctgtgccccgctggac
tactacaaatacgaggcagaggacgccgttggccactcccctagtgaccacaacctcccg
ggcaaggccaggccccaggctgaggttgactgtgtggagcacctcaacaaccagctgagg
agacacagacgccacagacgcatcgccaccacccagcagcagagggcagcactgagacgc
atccgccagctgcagcaaacgcctgatgtaaggagtgttcacagggagagatctcagggt
cacatggtcacctggactgggcctggttttgcccgggtcaaggatggcgctggactggtc
ttcacaatagacaacatcccccatgccatggagtatgacatcatgatccgctatgagcca
gagtctactgaggactgggaggccatagtgagtgttacctccctgctgctgcccaccagc
tcccgctgtggcaacctgcttcccactgaacagctctacactgtcaccctgccgcacaac
aggaggtatgtccagatgcccaggcctttctgctttgagcccagtaaccgttatgtcgtg
gccatcagattccagcgccacggagtgtcccagagacacctgaccgctttcatccttgtt
gattcactggtgctgatccccaagtacacggagctgcttggtttccagggtaacgaccct
gcggcggaggagcgccgtgatgagatggtgcgctacatgtgtctggactccttcatggcc
atgcccatgcccatgctggcagagatgtgcaccaagctcatctgcagcatctctgccatc
ctgcatgatggagctctgcaatgtcagtgcgacccccaggggtctctcagtgctgagtgt
gacagggtcggaggtcagtgtcgctgtaaacccaacgtgattggacaacggtgtgaccaa
tgtgcacctggcacctacggctttggaccatatggctgtaccgcttgtgactgccattcc
cagggctctctggggcaccagtgtgacccggtgacggggcagtgcccgtgcagacagggg
gccagtgggcgccagtgttcagactgccagcctggccagtggggcttccccagctgcagg
ccatgccagtgtaacggtcatactgatgactgcaacccacagacaggggagtgccagacc
tgcagagactacactgatggacagtactgtgaaaggtgtgtgaatggtttctttgggaac
ccagtgctggggtctggagatcactgtcgaccatgtccctgtcctgggaacccaggaagt
ggacactccaatggggactcctgtcacacggacatctcatccaatcagatcctctgcaac
tgtaaacagggctatacaggccctcgctgtgaacgctgtgcccctggttactatggcaac
attgagcacccaggcgggcagtgcctcccgtgccagtgcagtggcaacatcgacacccag
gacccagagtcatgtgaccccaggacaggacaatgcctgaggtgcctgtacaacacggac
ggcgcctcctgctccgactgtaaacctggttactatggcaacgccctggcccaggactgc
aggcgttgcacatgtgtaacagcaggtacacagcagtcctactgcactgacggtcattgc
cactgtgacagacagacaggagcatgcccgtgtcgggacaacgtggtcggccacaactgt
gaccagtgtgcccccgactactggaactatggcacagacagagggtgtgagcgctgtggc
tgccaccctctgcacgctatgggatcacattgcaacatgtttagtggacagtgtcactgt
cagcaaggctttgggggaaggcagtgcactgagtgtgagcagttccattggggagaccca
cgtgtgcagtgtgaagagtgtaactgtcaccctctgggctcggagatggcccagtgtgac
cgtgtgacaggggtgtgtgagtgtagggaaggggcggtggggcggcggtgtgacgagtgt
gcccgcgggttcaccggggtattccctaagtgtgtccggtgccacccctgctttgagctg
tgggacgacgcagtgtgtatgatccgccggaacctggaccacatccgttacgacatccag
aggatcctggagagcggtgagacgcccggcgtgggcgacaaacgcatcctcgagctggag
aacaacctggcccaggtacaggacctgatccgagacggagactgggacagactacaccag
ctgattggccagtccatcgatgacctcagagcagagatagctctgactgacggacgtttg
atgggtgtggcccgggagctgaatgggacagcggtgcaggacgaggtactaaggcggaac
ctgacccagatggagagagaactcagggacctcaacaccactctgatgcaccacctccaa
aaacaggagaacaacctcagctctggtttccaagatcagtttgacaatgtgaagaagtac
tacagtgagtcccagaaggctcaacagaagtgcaacgcctcagtgtctggtcctttcagc
cctgtggaggagtctaaagcaacacgcgcacacaccgaggacctcctgaacaagaggcag
gataagttcctgcgcatggtggcggcccagaagaaatcattgtcagagctgcagaacaaa
gcccaggacgtagacaaaaaagtccaccacctgagccacaaggtatgtggtggccattcc
aatgccagctccaatggcacatgccacgacagcccatgtgggggtgctggttgtcgtgac
aatgacggccggcgggtgtgtggaggggacgggtgtgacgggactgttagcgcctcccta
aagggactgaaacatgccaatgatgtctcagacaacctgactgctgccagtgaggatctc
cagggtatggctaagaagctccaggacattgctatgctgacccaggatgtgaagaatcaa
gccatggacaccctggacaaagcccagaagaagaaggacttatttgaaaactccaataaa
aaactcaaggaattcattcagaagatcaaagatttcctgactgaggagggtgcggaccca
gagagcatagagaaggtggctcagcaggtgctggccatatctcttcctgtcaacagaacc
actctggacagcatggtccagcagattaaagacaacattaacaacctgacagatgtagaa
ggggtcttcaaccacacctcccagcaactccaccaggccaaggagctgctcaaccgagct
aaggatgccaagacacgagcagaaggagtgaaggacacagccaacacgactaagcaggcg
ttggatgcgtctgaaaaggctattcagaaagcaaccaaagccctggaccatgccctgaac
aacctgaacagcaccaggaacaccaccgcaacggtggaggagaatcttctggatctggag
gtcaagcagatggatgctatgatgcgactggccaacctgtcgatgggggtagaggcacta
aaaactaagaccgatcagaacagggagatggccaaagatgccaagaaccaggccgaaaat
gccactaatgcagcatcgggactggagcagaggctgaatgaaacggaggatcggtacaag
gaactgcagatgaaggtggactctctgggcggggcctcggggggcctggggaacgtcaac
cagagggccaaggagatcaagaaggaggctgaagacctgctcactaaggccaacaagggc
atagaaacgctacggaagcttgagaagaagttccgtaataatgagcagaaaatgctggac
cagcagagcgagttaggagagctggagaggaacgccacggaagcacgggaggccatacga
aagcaggtgcagacatacaacaactgtaactga
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integrated database retrieval system
