Oncorhynchus nerka (sockeye salmon): 115132149
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Entry
115132149 CDS
T07952
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115132149 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115132149 (lamb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
115132149
NCBI-ProteinID:
XP_029520297
LinkDB
All DBs
Position
LG7:40162087..40205861
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AA seq
1797 aa
AA seq
DB search
MHASLVMFICALAYATAREPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCGSVFPGVSKGPLRK
VDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNAGGGVCDHC
LHNTMGRNCEMCKPFYYKDPSRDIRDPGVCTACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAANPRGCQPCQCDPRGTVSESPKCDPVSGDCFCKRLV
TGRSCDLCLPEHWALSHDMNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPPPVCMERGVSYTLRFEFSRYLDGNSILILGTTAANILVDSISLIPRYSSLEMFIGGDP
ASIARKQSYERYRCHEGAKSVTRPQISNVCAKLITSMSAIINHGALPCLCDPQGSVSSVC
DTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVTRSCDQLTGQCPCRPG
AFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCANGYYGN
PVLGTGMGNQCRACPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGGMVKRSEGSIK
RSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGL
CKSGYYGDASRRNCRKCTCSFLGTERTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKP
NYWNLASGRGCEACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRIQCR
VCDCDPRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QDLAVRTKTLSERAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNARNTTAEAVSSLMEL
IEDLRSQIGETTDTLNRLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQLDIL
KNSNFLGAYDSIRSSYNKSHDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNAKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCGGLN
CNGAVAMADNALERSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQATA
EKAIQRARADIGETEARLAQIESETSSSEHDLNDAMDRMGNLGREINALKLKRAHNSVAA
ARAEETATMARDKANEAKQILDGELMDKYHTVQELVDTKAKTVQEAKKKAERLRDEAKEL
LKDAQNKLQRLAELEKDYEENQKTLEGKAQQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatatgtgccctggcatatgccactgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaaggcatcatctacatgcggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaaatgtttccagtgtgactctcgccgccca
tatgatcctgtctacaacaccatcagtcaccgcattgagaacgtcatcaccacgttcaaa
ccacaccgcaagaagtcatggtggcagtcggagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacatttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctatgactgtggctcggtcttccccggggtatctaagggacccctacgcaaa
gtagacgacgtcatctgtgagtcgcgctactctgacatcgagccgtccacagagggagag
gcaatctacagagttctggaccctgccatccacattgaggacccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacactctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactatgccatgtacgag
ctggtcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctgaattgtgagctgtgtgatgacttccatagtgacatgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgtaactgtaacggccactccaaccagtgtcac
tttgacatggcggtttacttggccacgggcaatgccggcggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattttactacaaggacccc
agcagggacatcagagatcccggggtctgtactgcctgtgactgtgatcctgatggttcc
ctgaatgggggcatctgtgacgggcatgacgagccatccctgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaagggcatcgctgtgacaaatgcaagtctggcttcttt
ggcctgagtgcagcaaacccccgcggctgccaaccctgccagtgtgaccccaggggtact
gtgtcagagagcccaaaatgtgaccctgtgagcggggactgcttctgcaagcgactggtc
accggacgcagctgtgacctgtgtctgccagaacactgggcactgagtcatgacatgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctctatggag
aatggccagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtggtacttcatggctctggaccactatacctatgaggctgagctggccatattggga
cagggctgcagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaatatcccc
tactccatggagtacgacctcctcatccgctatgagccacagatgccacgggactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccttgtggaaac
accatccctgcagacgacatgctcactgtgtctctgcctgcaggatccaggtttgtcgtg
ctgcctccacctgtatgcatggagagaggagtgagctacactcttcgctttgagttcagt
cgctatctggatgggaacagtattctcattcttggtacaaccgctgccaacattttagtg
gactctatctccctgatccctcgttactcctccctggagatgttcattggcggtgacccc
gcctccatcgctaggaagcagagctacgagcgctaccgctgccacgagggggccaagagc
gtgacacgcccccagatcagcaacgtctgtgccaaactcatcaccagcatgtcagccatc
attaaccatggagccctgccttgcctgtgtgacccccagggctcagtcagctcagtgtgt
gacacgcacggaggtcagtgtcgctgtaggccaaacgtgattggacttcgctgtgaccag
tgtgctcctgggacgtacggctttggacctgcaggatgtaaagcatgtgagtgcaatctg
gaaggtgcggtcactcggtcctgtgaccagttgactgggcagtgcccgtgccgcccgggt
gcgttcggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cgatgcctgtgtaatggacatgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggacaacactggaggggacaaatgtgacaggtgtgccaacggttactacggcaac
ccagtgttgggcacaggtatgggtaaccaatgtcgggcctgcccttgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggggggatggttaagcgctccgagggttctatcaag
cgttcccggtgtgaggagtgcgcccctggttactacggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaataacattgacatgtcagatctggatgcgtgtgac
cggcggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggcttg
tgcaagagtggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtagc
ttcctgggcacagagcgtacccagtgtacagcgcgggatgagtgtgtctgccagcgtgcc
acggggcagtgccagtgtttacccaacaccatcggcctgacatgtgaccactgtaagccc
aactactggaacctagctagtgggcggggctgtgaggcctgcggctgtgaccccaacaat
gctgtcaactcggcctgcaacgagttcactggaaagtgtcagtgtcgtgatggattcggt
ggaaagacctgcacagactgccaagagaactactggggagaccccaggatccagtgcaga
gtctgtgactgtgaccccaggggcatagagacatcccagtgtgaccagaagtcaggccac
tgtgtgtgtcagcagggggtgtcaggcgtgcgttgtgaccagtgtgcgaggggcttctca
ggccagttccctaactgccagccctgccatcagtgctttggggactgggaccgggtggtg
caggacctggctgtccgaaccaagaccctgtcagagcgggctcaagagatccagaccacg
ggcctgactggagcctatgagaaggccttcagagacctggagaagaagctggcacaggcc
cagggcatcgtcaacgcccgcaacaccaccgcagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggtgagaccacagacacactgaatcgtctggaggga
gacctgaccagtgtgcagaacagcaacgttgaggccagtaatgagctcagtgctctggag
agagaggccaaacagctaaacctgacctcagatcagctccaccgtcaactggacatcctc
aagaactccaacttcctgggtgcatatgacagcatccgcagctcttataacaagtcccat
gatgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgttagccaatca
gcagacacacgccgcaagacagaacgcctcatctctgccaagaaagatgacttcaaccgt
aagaacgctgccaacaagcgagccctgggggacctcaatgccaaggctcagaccctggac
atgaagaagatcaacgagaaggtctgtgggacccctggcgatgccccctgtgcagagagt
ctttgcggaggagcaggttgccgtgacgatgaggggaataggcactgcggaggcctgaac
tgcaacggtgccgtagcgatggcagataacgccctggagaggtccaagcacgcagagaaa
gagctgaacaaagccatgggggaggtagaggagctcttccacaaggttgcagatgccaag
accaaggcagaggaggcgaagagtaaagcccaggcagctctggacaaggccaccaacacc
aagaacaaggtggagcgctccaacaatgacctgcgggacctcatcaagcagattcgggac
ttcctcatgcaggagggtgcggatccagacagcattgagacggttgccaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccggagcctctccaacgtagacgccattctgcaacagacacaggacgatgtgcgc
aaagcagagcagcttctgcaggaggccaagaaggccaggaatcgggcagagggggtgaaa
tccacagcagagacagtaaaacaggcacttgaggatgctaagaaggcccaggccacagca
gagaaggccatacaacgggctcgggctgacattggtgaaacggaagctcgactagcacag
attgagtctgagacctccagcagtgaacatgacttgaatgatgccatggaccgcatgggc
aacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagcgtggcagca
gctcgagctgaggagacagccactatggcacgggacaaagccaatgaggctaagcagatt
ttagatggcgagctgatggataagtatcacacagtgcaggagttggtggacacgaaagcc
aagaccgtccaggaggcgaagaagaaagcagagcgcctaagagacgaagccaaagagcta
ctgaaggacgcccagaacaagcttcagagactagcagagctagagaaagactatgaagag
aaccagaaaacgttggagggcaaagcccagcagctggacggcctagaagacaagatgaag
gctatcctcaacgacatcaacaaacagatccagatctacaacacctgtcagtaa
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integrated database retrieval system
