Oncorhynchus nerka (sockeye salmon): 115132189
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Entry
115132189 CDS
T07952
Name
(RefSeq) neural cell adhesion molecule L1-like protein
KO
K06758
L1 cell adhesion molecule like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115132189
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
L1 family
115132189
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Ig_6
C2-set_3
Ig_PDGFR_d4
Receptor_2B4
Adeno_E3_CR1
Reprolysin_4
DUF2019
Motif
Other DBs
NCBI-GeneID:
115132189
NCBI-ProteinID:
XP_029520392
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All DBs
Position
LG7:complement(42257773..42358759)
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AA seq
1134 aa
AA seq
DB search
MRSLWSLGLAFLLALTSRAGGLDIPLEVEQLPTITVQTAGPVIALPFEGSFSMRCEAKGN
PQPVYRWTKDGQAIDPLFDLGVKKERNNGSFVIHSGRLAQFQGMYQCYASNNLGTAVSEE
IELIVPSTPKFPKEEIAPIVVKEGQPVILECNPPQGIPPRKIYWMNIGLQHIEQDERVSM
GHDGNLYISNALEKDSRRDYCCFAAFSVIRTIVRKTAMSVVVKSSYAIPERRPSLLVPSG
VQSEVRLLKGEELVLECIAEGFPTPVIEWTKRTEKLPKRANLKNYGKRLTINNIEEEDDG
KYTCEARNSVGDTVHYFNVMVEEPPRWQPEPPKGQLAVVGSDVHIKCSASGKPRPVISWR
KNGQPLDDGPSSNRQVLDDTIVLHRARPEDSAVYQCEVSNRHGTILANANIMIINLPPRM
LTKDYQRYSVVQGRDIIMDCKVFSSPPSNVSWNKDDSTESVEGERFSVFKNGSLQINQAG
KEDSGEYVCFATNSEGKSTITALLDVKDPTQIVEPPQDLHILSGTTAQLTCQAEYDISLR
NEFQIVWSKDGEEIPPFTEQSRYFLDDGMLQIINVNQSDKGTYTCTARTNLDQDTASALL
TVLDVPDAPEDVELSEQKSWSVRLAWVPGDDHNSSATEFIVEYEESQWDPGTWRELQRVP
GNQVTALLTLHGHLNYQFRVYAVNGIGKGPPSNPTDRYKTPPAAPDKNPENIKIQGHLPH
QMDISWEPLLPVEHNGPGLEYKLSYRKLGVEDIWKEHLVKRHAFVIKNTPTFVPYEIKIQ
SRNSHGWGPEPKVVTGYSGEDLPTASPQDVAVEVLNTTLLRVSWTRVSQETLRGHLGGYN
VHWLRKRSLLHSNRIPEERHFLTFPGNRSHAMVPGLRPFSEYRLTVNVFNKRGNGPNSDP
VTFQTPEGVPEQVPILTVSNAQRDSITLVWAPPFEANGILTGYLLQYQLLNETLAMGDMQ
EVNVSSADTTQWLLQGLEEMSKYMFYLSACTRVGCGPQRMEEGSTVTEASLASLHLGVST
QGWFIGMMCAVALLTLTVLIACFVTRNKGGKYAVKEKEDLHPEVESQGMNDDTFCDYSEE
NPLKASQCSLDRGMGGDSDYGDEEECQFNEDGSFIGEYSGHKNRGSVRPSPVTA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgctgtggagcttgggccttgctttcctcttggccttgacctccagggccgga
ggactcgatatccccctggaagtggagcagctaccgaccataacagtgcagaccgctggc
cctgtcattgccttaccctttgaaggcagtttttccatgagatgtgaagccaaaggcaac
ccacaaccagtatacagatggacaaaagatggccaggccatagatcccctcttcgacttg
ggggtcaaaaaagagagaaacaatgggagttttgtgattcatagcgggcgccttgcgcag
ttccaggggatgtatcagtgctacgcttcaaacaatctgggaacagcagtatcagaggaa
attgaactcattgtaccaagtaccccaaagttccccaaagaggagattgccccaatagtt
gttaaagaaggccagcctgtgattctggaatgcaatccaccacaggggatccctccacga
aagatctactggatgaatattggtctccaacatattgaacaggatgagagggtatccatg
ggccatgacggcaacctctacatctccaacgccctggagaaggatagccggagagactac
tgctgcttcgctgcattctccgtcatacggaccatcgttcggaagacagccatgtcggtg
gtcgtcaagagctcctatgccattccagagagaagaccgagccttctggtaccctctggt
gttcaatcagaggtacgtctgctgaaaggagaggagctggtcctagagtgtatagcagag
ggatttccaactcctgtgattgaatggacaaaaaggacagagaagctaccgaaacgggca
aatctaaaaaactatgggaaacgtttaaccattaataacattgaagaggaggatgatggg
aagtacacgtgtgaggcgaggaactctgtcggagacacagtccactacttcaacgtcatg
gtggaggagccaccaagatggcagccggagccacccaagggccagttggctgttgttggc
tctgacgtgcacatcaagtgctctgcctcgggaaagccacggccggttatctcatggagg
aagaacggacagcctctggacgatggcccgtcatcgaacagacaagtgcttgatgacacc
atagtgttgcacagggccaggcctgaggacagtgccgtctaccagtgtgaagtctccaac
agacatggcaccatcctggctaatgctaacatcatgatcataaatctcccacctcggatg
ctgactaaggattaccagcgatattcagtagtgcaagggagggacatcatcatggactgc
aaagtattcagctctcctccatccaatgtttcctggaacaaggatgactctacggaatct
gttgagggggaacgattctcagtttttaagaatggatcgctgcagatcaaccaggcaggg
aaagaagacagtggggaatatgtatgtttcgccaccaattcggagggaaaatcaaccatc
acagccttgttggacgtcaaagatcccacccaaatcgtggagccgccgcaggacctgcac
atattaagtggaaccacagcccagcttacatgccaagcagagtatgatatatctcttagg
aacgagtttcaaatagtctggagcaaggatggggaagagatacccccattcacagaacag
tccagatattttctggatgatggaatgctacaaattatcaatgtaaaccaaagcgacaag
ggaacatacacatgtaccgccagaaccaatctagaccaggacaccgcctctgcacttctt
actgtactggatgtccctgatgcgccagaggatgtggagctgtctgaacaaaagagctgg
agtgtccggttggcctgggtacccggtgacgaccacaacagctctgccactgagttcata
gtggagtacgaggagagtcagtgggatcctgggacctggcgagaactccagcgagtccct
ggcaaccaggtcacagctttgttgacattacacggccacctgaactaccagtttagagtg
tatgcagttaatggcattgggaaagggcccccaagcaaccccacagaccgatacaaaacc
cctcctgcagctcctgataaaaacccagaaaacatcaaaattcagggtcatctgccccat
caaatggatatcagttgggagccactattgcctgtggagcacaatggtccaggcctggag
tacaagttgagctacaggaaactgggagtagaagatatctggaaagagcatcttgtcaag
agacacgcctttgtcatcaagaacacccccacattcgtcccctacgagatcaagatccag
agtcgcaacagtcacggctggggcccagaacccaaagtagtgacagggtactccggggaa
gacttgcctacagcttccccacaggacgtggcagtggaggtgttgaacaccacccttctc
agagtcagttggaccagggtttcccaggaaacattgcggggtcatctgggaggctacaat
gtgcactggttgaggaaacggagtctcctacattccaacagaattcctgaggagagacat
ttcctgacgttcccagggaacaggagccatgccatggtacctggcctcagacccttctcg
gagtacagacttaccgtcaacgtctttaacaaaaggggcaacggccccaatagtgacccc
gtcaccttccagactccagaaggagtccccgaacaagtgcccattctgacagtgtcaaac
gcccagagagactctatcaccctggtgtgggcacccccctttgaggccaacggcatcctt
acgggatatctcctgcagtaccaactcttaaatgagacgttggcgatgggggacatgcag
gaggtgaacgtcagcagtgccgacaccacccagtggctcctgcagggcctggaggagatg
agcaagtacatgttttacttgagcgcctgcaccagggtgggttgcggaccccagcgcatg
gaggagggtagcacggtcacagaagcaagtttggccagtcttcacttgggagtttccacc
cagggctggttcatcgggatgatgtgcgctgtggctctcctcaccctcaccgtgctcatc
gcatgcttcgtgacccgcaacaagggtggcaaatacgcagtaaaggaaaaggaggatctc
caccctgaagttgagtcccagggcatgaatgatgacacattctgtgattacagtgaggaa
aacccactgaaggctagccaatgttccctggatcggggcatgggaggggacagcgactat
ggggacgaagaagaatgccagttcaacgaagatggttcatttatcggtgaatactctggc
cacaaaaacagaggctctgtaagacccagcccagtcactgcgtga
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