Oncorhynchus nerka (sockeye salmon): 115132197
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Entry
115132197 CDS
T07952
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132197 (casz1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115132197 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
115132197
NCBI-ProteinID:
XP_029520400
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All DBs
Position
LG7:complement(42786358..42880675)
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AA seq
2086 aa
AA seq
DB search
MPCFVERILPEQEGEVRHNTEGGLLPGLLPAERTLCTEKSSGKSNMAGKRKGGLKLNAIC
AKLSRQVVYDGSSQHAEGDHSVAENSERGSSHYDDSGERFETNFPEGLSLGQSLDEDQKR
RKAIEKWVNGEYGDEPPPSALDCGEEQQQQQGLKPNNGEDGPPEGVYMVQPKGCSDEEDN
APDEPEPMFDSRPDDKDSEDGPQKDAYMPLISEPPSRQTSFSSPGEASTLRDYAANTMNE
FLGMFGYDDQQVRDELAKKISFEKLKAATSGSDPSSLSSEEATRRARFSKYEEYIRKLKA
GETLPWPIHTNPKQEDLNSKLAQEKNALLQAQMAASGGCHSGAEGQIYHSSLDHKQGQGQ
GHNLGHNPPPTNPTSHLQNMASRASKYDFFIQKLKMGESLRSQQNGNAYKKPSKYDLENV
RYLHLFKPGDGNTDMGGAIAYKTGKVGRPSKYDIKNIQKLMPGRPESSLMPSVLPATPGN
PGTPVAATSASSAGATGPPGLIMDQTGHLGFNTSDYMKSSFSKTDSITTGTVSSVKNGLP
PEKPVTEDVNLYQKYIARSRQTFPKPLPPPPPPPYPEPPTTPPTFKRFSGSQHCGHVHCA
YQYREHYHCMDTECNYQRFTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCH
LNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKKNAQLINDGFQRFRATEDCGTVECQFY
GQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSK
ATNHFHCIRSSCGFTFTSTSQMTSHKRKHERRHIRSSGVMALSSGGSFLMPKEEPGDESS
NDDLMDFSAISSKNSSLSASPTTQQSSNGPGAHLLATPTTVMSSSGGGHSGLKPTSSLPH
SARMSSLLSQALPSNMPVALALSNSALASVNNPFFPLMPRLPMQLPHSAASLISAVSSGA
HSMPTDSLSQGGCSSAGSDGAMASTPTSYASASSIMEKISASKGLISPMMARLAAAALKP
SGNHQDTGNGLAGSSASLFNLVQVKQEPVDHTSGASQDSIQEHSLDLSKKDHSNESNGHP
VPGNTSLLSSLMNKMNAGFFSALNLKTEMEIGQGADTSEAAQYLSRIMKRPMPDKPSELW
RTYLRRFDTEDFCEAQCDFLQKVHFHCLVEDCGALFSTMDGAIKHANFHLRATLKVKSEP
HFNKVKDCGDGASHQSTAPVSMANNPAMDVANMSSSSGGGYGSSPSLLAWKQLTGSIPQL
NASMPNLPANSPLATTSLENAKPQVKPGFLQFQDNSYSDPCLATDCKYSNKVHFHCLFGN
CKYVCKTSGKAESHCLDHINPNNHLVNVRDQFSYFSLQCLCPNQHCEFRMRGHYHCLRSG
CYFVTNITTKLPWHVKKHEKAERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIRESCQ
FSFLLKHQMTSHSRKHMRRMLGKNFDRVPSQVVSHGHRADDMQHLSGMGSGLMGSHPGMT
HGFSSMMDETDDYMDYMGGGSPLCLSSESSNQDRSCSSTPVGNESSPAGPGCPVTTAPST
PADTSAPQNAPPPPPPPQPGLQSQAPSFPPALLRPPLPSLPYLVSPSCLSYSLLSASLGA
TRSVVMPTNTPAFSPIIATPSPVKNDVPIVQDAAGNTISIPTATGAKKRFWIIEDMSPFG
KRRKTASARKMLDEGMMLEGFRRYDLYEDCKDSGCQFSLKVTHYHCTRENCGYKFCGRTH
MYKHAQHHDRVDNLVLDDFKRFKSSLSCNFSDCQFSGNSTHFHCLRCSFRCTDSTKVTAH
RKHHGKQDVISAAGFCQFSSSADCEVADCKYKLKCSHFHCTYPECKHTVVGMSQMDSHKR
KHEKQERGELPSVSPRQEGAHHMTGGVSAVPHASMGLLPASPGGLPGLSHHHHHHHNNNN
HAPSMLYPPASVASDYNHPYPTSLVSLDSSLNLGTDTSSSLFFLKNAAGLGLNDSLDLSK
KMQHHHDPSLTMAAGPNPMPPLGLPAPQDDTTGTSGDPEDDQSPEEEANAEEDEEDEDEA
EEDLNTDSYEDSMPQPDGDNKDNDESFDASLNHTDTSQLEKQEANP
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgccttgctttgtggagagaattcttccagagcaggagggagaggtgagacataacaca
gagggcggtctcctgccaggtctcctgccagctgaaaggactttatgcactgaaaagagc
tcaggaaaatccaacatggccggtaaaaggaaaggtggcctaaaactcaacgcaatctgt
gccaagctgagccgtcaggtggtgtacgacggcagctcccagcatgctgagggagaccac
agcgtggcggagaacagcgagcgcgggagctcccattatgacgacagcggcgagcgattc
gagaccaacttccccgagggcctgagtctcggccagagcctcgatgaggaccagaaacgg
cgcaaggccattgagaagtgggtcaacggggagtatggggatgaaccaccaccctctgcc
ctggactgtggggaggaacagcagcaacagcagggactcaagcccaacaatggcgaggac
ggaccccccgagggtgtgtacatggtacagcccaagggctgtagtgacgaggaggacaac
gcgcctgatgagcccgaacccatgttcgactctcgtcccgacgacaaggactcggaagac
gggcctcaaaaggacgcctacatgccgttgataagtgagcccccgagtcgccaaacatct
ttctcctctccaggagaggcgtccactctgcgagactacgcagccaacacaatgaacgag
ttcctgggcatgtttggctacgacgaccagcaggtgagggacgagctggccaagaagatc
agcttcgagaagctcaaagccgctacctcaggctctgacccatcctccctgagcagcgag
gaggccacgcggcgagcccgcttttccaagtatgaggagtacatccgcaagctgaaggct
ggtgagaccctgccctggcccatccacaccaaccccaaacaagaggacctcaactccaag
ctggcccaggagaagaatgccctgctccaggcccagatggccgcctctggggggtgccat
tccggggccgagggccagatttatcactccagcctggaccacaagcaggggcaagggcag
gggcacaaccttgggcacaatcccccaccaaccaaccccacctcccacctccagaacatg
gcctcccgagcctccaagtatgacttcttcatccagaagctgaagatgggtgaaagcctg
cggagccagcagaatggcaatgcttacaagaagccatccaagtacgacctggagaatgtt
cggtacctgcacctcttcaagcccggcgacgggaacactgacatggggggcgccatcgcc
tataaaacggggaaggtgggccgcccgtccaagtatgatatcaagaacatccagaagctg
atgccggggaggcccgagtcctcgctgatgcccagcgttctgcctgccacacctgggaac
ccggggacaccagtggctgccacctcggcctcctccgctggggccacgggccccccagga
ctcatcatggatcagacaggccacttgggcttcaacacctccgactacatgaagtccagc
ttctccaagaccgactccatcaccacgggcactgtgtcctctgtcaagaacggcttacca
cctgagaaacctgtcacagaggacgtcaacctgtaccagaaatatatcgccagaagccgt
caaaccttcccgaagcccctaccaccaccaccaccaccaccataccctgagccccccacc
acaccaccaacttttaaaaggttctcggggagccagcactgcggacatgtgcattgtgcc
taccaatacagggagcattaccactgcatggacacggagtgcaactaccagaggttcacc
agcaaacaagacgtgatcaggcactacaatatgcacaagaagagggacaactccctacag
catggcttcatgcgcttcagcccactggacgactgtagcgtctactaccatggctgccac
ctcaacgggaagagcacccactaccactgcatgcaggtgggttgcaacaaggtatacacc
agcacctccgatgtcatgactcacgagaacttccataagaagaacgcccagctgatcaac
gatggctttcagaggttccgcgccactgaggattgtgggacggtggagtgccaattctac
gggcagaagaccacccacttccactgcaggcgcccggggtgcaccttcaccttcaagaac
aagtgcgacattgagaagcacaagagctaccacatcaaggatgacgcatatgccaaggat
ggcttcaagaagttctataagtatgaggagtgcaaatacgagggctgtgtctacagcaag
gccaccaaccacttccattgcatccgctcaagctgcggcttcaccttcacctccaccagc
cagatgacctcccacaagcgcaagcacgagcgccgccacatccgctcctcaggcgtgatg
gccctctcctctggcggctccttcctgatgcccaaggaggagcccggagacgagtcgagc
aacgacgacctcatggacttctcggccatcagcagcaagaactccagtctgagcgcctcg
cccaccacccagcagtcgtccaacggtcccggcgcccacttgcttgccacacccaccacg
gtgatgtcgtcctccggcggtggccacagcggcctcaagcccacctcctcgctgccgcac
tcggcacgcatgtcaagcctgctatcccaggcgctgcccagcaacatgcctgtggcactg
gcgctgtccaacagtgccctcgccagcgtcaacaatcccttcttcccgctcatgccccgg
ctgcccatgcagctgccccattcggccgccagcctgatctcggccgtgtcgtctggcgcc
cactccatgcccaccgactcactgtcccagggcggctgctcctcggcgggcagcgatggc
gccatggcatccacgccgacctcctacgcctcagcctcttccatcatggagaagatctct
gctagcaagggcctcatatccccgatgatggccaggctggcagcagctgccctcaagccc
tctggcaaccaccaagacacagggaatgggctggctggttcttcagcgagtctgttcaat
ctggttcaagtgaagcaggagccagtcgaccatacctccggggcctcccaggactccatc
caagagcacagcctggacctgagcaaaaaagaccacagtaatgaatcaaacggacaccct
gtaccgggaaatacatctcttttatcctcgcttatgaataagatgaatgccggcttcttc
agtgccctgaacctgaagacggagatggagatcggccaaggggccgacacctcagaggca
gcacagtacctgagccgcatcatgaagaggcccatgccagacaaaccaagcgagctctgg
aggacatatctgcgcaggtttgacacggaggacttctgcgaggctcagtgtgacttcctg
cagaaggtccacttccattgtctagtggaagactgcggggcgctcttcagcacgatggac
ggagccattaaacacgccaacttccacctacgagccacgctgaaggtgaaatcagagcct
cacttcaacaaagtcaaggactgcggcgacggagcatcccaccagtccaccgcccctgtc
tccatggctaacaaccccgccatggacgtggccaacatgtcatcatcgtcaggcggcggc
tatggctcctccccctcactgctggcatggaagcagctgacgggcagcatcccacagctc
aatgcctccatgcctaacctgcctgccaattcgccgctggccaccacctctctggagaac
gccaagccacaggtcaaaccgggcttcctgcagttccaggacaattcatacagtgaccct
tgcctggccactgactgtaagtactccaacaaggtccacttccactgtctcttcgggaac
tgcaagtacgtctgcaagacctcggggaaggccgaatcccactgcttggaccacatcaac
cctaacaaccacctggtcaacgttcgagaccagttctcctacttctccctccagtgtcta
tgtcccaaccagcactgtgagttcagaatgaggggccattaccactgtctgcgatccggc
tgctactttgtcaccaacatcaccaccaagcttccctggcatgtcaagaagcatgagaag
gcagagagacgcgccgccaatggcttcaaatacttcaccaagagagaggagtgtggcagg
ctaggctgcaagtacaaccaggtgaacagtcacttccactgcatccgcgagagctgccag
ttctccttcctgctcaagcaccagatgacctcgcactcccgcaaacacatgaggagaatg
ctgggaaagaactttgacagggttccatcccaggtggtatcccatggccatagggccgat
gacatgcagcacttgtcgggcatgggctcgggcctcatgggcagccacccggggatgacc
catgggttctccagcatgatggacgagacggatgactacatggactacatgggcgggggc
agccccctgtgcctttcctctgagtcctccaatcaggaccgcagttgcagcagcaccccc
gtgggcaatgaaagctccccagcaggaccaggctgcccggtcactactgctccctctacc
cccgctgacactagcgctccccaaaacgcacctccaccaccacctcctcctcagcctgga
cttcagtctcaggctccatctttccctcctgccctcctccgacctcctcttccctcgctc
ccatatctcgtctctccatcctgtctgtcatactctctgctcagcgcctctctcggagcc
actcggagtgttgtcatgccaaccaacacgccagctttcagccccatcattgccactccg
tctccggttaaaaatgacgtccctatagtgcaggatgctgcaggcaacaccatctccatc
cctacggccaccggcgccaagaaacgcttctggatcatcgaggacatgtcccccttcggc
aagcggcgtaagacggcttctgctcgcaaaatgctggacgagggcatgatgctggagggc
ttccgccgttatgatctgtacgaggactgcaaggactccggctgccagttctctctgaag
gtgacccactaccactgcacccgcgagaactgcggctataagttctgcggccgcacgcac
atgtacaagcatgcgcagcaccacgaccgcgtggacaacctggtcctggacgacttcaag
cgtttcaagtcatcgctcagctgcaacttctccgactgccagttctccggcaacagcacc
cacttccactgcctgcgctgcagcttccgttgcacggacagcaccaaggtgactgcccac
cgcaaacaccatggcaagcaagatgtgatcagcgccgctggcttctgccagttcagctcc
agcgctgactgcgaggttgccgactgcaaatacaagctcaagtgctcacactttcactgc
acctaccccgagtgcaagcacactgtagtcggtatgtcccagatggactcccacaagcgc
aagcatgagaagcaggagcgcggcgagctgccgtcggtgtctccccgtcaggagggggcg
caccacatgacgggaggagtgtccgcggtgccccacgcctccatgggccttcttccagcc
tcgcccggtggcctcccaggactctcccaccaccaccatcatcatcataacaacaacaac
catgccccctccatgctctaccccccagccagcgtggcatctgactacaaccacccctat
ccaacctccttggtcagtctggacagctccctcaacctgggcaccgacaccagcagctcc
ctgttcttcctgaagaacgccgctggcctgggcctcaatgactcgttggacctgagcaaa
aagatgcagcatcaccatgacccgagcctgaccatggctgccgggcccaaccccatgcca
ccgctgggcttgcccgctcctcaggatgacaccacgggaacatcgggcgaccccgaagat
gaccagtcacccgaggaagaggccaatgcagaggaagatgaggaggatgaggatgaggcg
gaggaggatctgaacactgactcgtacgaagattcgatgccacagcccgacggcgacaac
aaggacaatgacgagagttttgacgcttccttaaaccacactgacacttcccaactggaa
aagcaagaggccaacccatga
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integrated database retrieval system
