Oncorhynchus nerka (sockeye salmon): 115132199
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Entry
115132199 CDS
T07952
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115132199
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115132199
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115132199
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115132199
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115132199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
115132199
NCBI-ProteinID:
XP_029520412
LinkDB
All DBs
Position
LG2:complement(1490305..1517310)
Genome browser
AA seq
2595 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQAVSPNPSTTEPSPVSPPAVEEEQGQGD
SAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEA
CQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELLA
TATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQ
TLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELK
KEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNAL
NEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEK
ILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKES
WTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKI
LDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFPN
QGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQLN
LKDKALITAKLTQVSATVPSSPDSSSDSSTASPSNHGNHFSEGPNPEVEGCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTVENLRAICLDHAKLGENSLSP
TLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNN
FLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQVTHDQ
ALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQASKYIPDLCVIRAVQ
KIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFALLPTAL
DTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGVE
ETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASIVYLQYVKSGEF
PTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQENE
TNADGTAREEVFAYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHSSMLSKVLGGSFADQKICRD
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQM
IMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDCGAGGSADSGQKERWYK
FDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDAA
GGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYSLEYFQF
VKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPAGDWYD
ALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADGP
CPVPTSSPEGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAE
KTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSINGN
PSLANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQ
FSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDT
IQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYT
GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKEPDDQEATEDHD
SSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWESTTEE
VGPVALPPAVQTTKE
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacgcgtggctcccccgtggggggaaatgatagccagggccaggcacct
gctgattctcagagccagcccccacccacacaggcccaggcggtgtcccccaacccgtcg
accacggagccgtctcctgtgagcccaccggcggtggaggaggagcagggccaaggagac
tctgcccctgctctggaggaggaggagcctgccttccctcacactgacctggccaagctg
gacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaattagaa
gttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgaggcg
tgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcacagacgag
gctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacaccggctg
gtggagctgtgtgtgaccaagcttcctcaggactggttccccttactggagctactggcc
acagccaccaacccccactgcaagttccacatctacaacggcacgcggccctctgagacc
atccccgccggggccacgctggccgacgacgagctcttcgcccgcccacctgaccctcgc
tcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggtttcag
actctacacgaccgcttcatgagcggacaggcactcaacgtacagatcatcgctgccctc
atcaagccgttcggacagtgctatgagttcctgaccttgcacacagtgaagaagtacttc
ctgccagtgatcgagatggttcctcagttcctggagaatctgacggacgaggagctgaag
aaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtccctgaaa
aacctggcctccagggtgcccggtcaggaggagaccgtcaagaacttggagatatttagg
ttgaaaatgatccttaggttattgcagatttcctcattcaacggcaagatgaatgccctg
aacgaggtcaacaaggtcatctccagtgtgtcctactacacgcatcggcatggcaacccc
gaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccacatc
ctgtccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaactagagaag
atactccgcttcgtcatcaaggagaaagccctcaccatgcaggacctggacaacatctgg
gcagcgcaggctggtaagcacgaagccatagtgaagaatgtccatgaccttctggccaaa
ctggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggagagt
tggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcg
gaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaacctggct
cacagtgacgacgtccccgtggacatcatggaccaggccctcagcgcacacatcaagata
ctggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgcttc
atcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatcagagag
atctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcctcat
gtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcactctg
gtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagctgaacac
gcagactttgaccctcagacggtcagagtgggaagtcgctacagtcatgttcaggaggtc
caggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgtgct
cctcaggccaagcagatctggaggtgtctggctgagagcgctgtcttcctgtgtgaccgg
gaggcgtgcttcaaatggtactctaagctaatgggagatgagccagacctggacccggac
atcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctcacggag
aacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgccgcgagggcaaactg
gtggccaaacgcagggcctacatgatggatgacctggagctcataggactggactacctc
tggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctgaag
gagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgaggac
ttcatccagttgtgttttgaccgtctgaaggcgtcgtacgacacgctgtgtgtcctggac
ggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggttcgcgtgctc
accgtgctcaaggagtacatcaacgagtgtgacagcgactaccacgaggagaggtccata
ctgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttccctaac
cagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggttcg
gtgcgccgtggcatcctcacacgcattaaggccaacgccacgcacaccaagatagagctc
ttcattggcggggaggttgtcgacccggcggatgacaggaagctgattggacagctcaac
ctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccctcc
agtcctgacagctcctcagactcctccactgcctcgcccagtaaccacggcaaccacttc
agcgaaggacccaacccagaggtggagggctgcctgcctggagtgatcatgtctctccac
ctgcgctacatctcgttcctgtggcaggtagcagacctgggctgtaccctcaacatgcct
ctgctgcgagatggagccaggctcctcatgaagcttatgcctccagacaacggtaccgtg
gagaacctgcgcgctatctgtctggatcatgccaagctgggagagaacagcctgagcccc
acactggactctcgcttctttggcccctcgccctcacaagtcctttacctcactgaggtg
gtgtatgcgttgctgatgccggccagcggcaccctcggtgaggacgccagcgacttccag
tacaacttcctgaagagcggcggcctcccgctcgtattgagcatgctcaccaggaacaac
ttcctgccgtcggccgacatggagacgcggcggggggcgtacctcaatgccctgaagatt
gccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcctgc
cagcccgtagtggaggggaccagccccgcatcaccaatcaaccaggtgacccacgaccag
gccctggtcctccagagtgctctacagaatatcccgaaccccgcctctgagtgcatgctc
cgcaacgtggccatacgactggcccaacagatctctgacgagtctctgcccccgaactcc
cagaacttcttccaagcatccaagtacatcccagacctctgtgtgatccgggcggtgcag
aagatcgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaagag
atcagtcagatctatgagaagacgaacgcgggtaaggagccggacggggaggatgagatg
gtgtgctgtgaggcactggagatcatgaccctgtgttttgccctgctgcccaccgctctg
gacactctcagtaaggagaaggcctggcagacttacatcatagacctgctactgcactgc
cacagcaagtcagttcgtcagatggctcaggagcagttcttcctcatggccactaggtgc
tgtatgggacacagacccctcctattcttcatcaccctcctcttcaccgttttagggagc
acggcgaaggagagggcgaagcacgcaggggactactttacgctgctgaggcacctgctg
aactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaataacgag
atcgactggctcaagaagatcagggatgaggtgaagcggacaggagagactggggtggag
gagaccattctagaaggtcacctgggggtcaccaaggagctgctggccttccagacacca
gagaagaagtactacattggctgtgagaagggtggggccaacctcataaaggagttgata
gatgacttcatcttcccggcgtctatcgtgtacctgcagtacgtgaagagtggggagttc
cccacggagcaggccatccctgtctgtagcagccccgcctccatcaacgccggcttcgag
ttgctggtggctctgccggtcggctgtgtccggaacctcaagcagatcgttgatacactc
acagatatgtactacctaggttgtgaggctctgacagagtgggaatacctccccccagtg
gggccgcggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctacatg
aactctgtcatccagcagctctacatgatcccgcccatccgtaacggtgtcctggccgtg
gagggcactggcaccgacgtggacgatgaactgtccggggacgagaagcaggagaacgag
actaatgccgacggaacggcgcgggaggaggtgttcgcctaccaacaccagtttgacgac
aagccctcgctgagtaagtctgaggacaggaaggagtacaacattggggtgctacgccac
ctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccgaggt
ttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcacgatgcc
ctggagttcttcaactctttagtggacagtctggatgaggctctgaaggccatgggccac
tcctccatgctcagcaaggtgctgggaggctcctttgccgaccagaaaatctgccgtgac
tgcccccacaggtatgagtgtgaggagtccttcaccacgttgaacgtggacatcaggaac
caccagaacctgctggactctatggagcagtacgtcaaaggagacttgctggagggagcc
aacgcataccactgtgagaagtgtaacaagaaggtggacacagtgaagcgtctgctgatc
aagaagcttcctccagtgctggccatccagctgaaaaggtttgactacgactgggagagg
gagtgtgccatcaagtttaacgactactttgagttccccagggagctggacatggagccc
tacactgtggccggggtggcaaagctggagggagatgacggcaacccggagagccagatg
atcatgcagaacgaaccatcggaacctgacccaccaggctgcagttctaagtaccgcctg
gtgggggtgctggtgcattcgggccaggccagcggcggccactactactcctatatcagc
cagcgagactgcggcgccggcggtagcgccgacagcgggcagaaggagcgctggtacaag
tttgacgacggtgacgtgacggagtgcaagatggacgacgatgaggagatgaagagccag
tgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcctac
aggaggcagaagagatggtggaacgcctacatcctgttctatgagaggatggatgcggca
gggggaggggccgcagtggaggcagacggagagctggccaggtgcatctcagagctgact
gtgtctcccactacaccacgacaggtgacgatgccgggggccattgaatgcagtgtgagg
aagcagaatgtccagttcatgcacagccgtatgcagtacagcttggagtacttccagttc
gtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccgggtcaggaccac
ctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttcctc
ttcagcaccgggttccacaccaagaaagtagtccgggggcccgccggtgactggtatgac
gccctgtgcatcctgctgcgccacagtaagaacgtccgctgctggtttgcccacaacgtt
ctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgccgaggtc
cggggggccttcgccaaactcatcgtcttcatcgcccacttctctctggcggacgggcca
tgccccgtccccaccagctcccctgaggggtccacacagggctgtgataacctgagtctg
agtgatcacctgttgagggctgtgttgaacctgctcaggagagaggtgtcagagcacggc
cgacacctgcagcagtacttcaacctcttcgtcatgtacgccaacctgggtctggcagag
aagacccagttgttgaagctgagtgtccctgctaccttcatgctggtggctctagatgag
gggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtggtc
tcccagctactgcgttgctgtgacgtctcaacacgcatgcagtcgtccatcaatggtaac
ccgtccctggccaacccgtacggagacgccaacctgaccacccccatcatgcccctgcaa
cagctggtgtcagagatcctcttcgttaggaccagctatgtgaagaagatcatcgaggac
tgcagcaactctgaggagacggtcaagctgctgcgcttcagctgctgggaaaacccccag
ttctcctctactgtgctgtctgagctgctctggcaggtggcgtactcctacacgtatgag
ctgaggccttacctggacctgctgctgcagatactgctgatagaggactcctggcagacc
cacaggatccacaacgtgctgaagggtataccagacgacagggacggcctgtttgacacc
attcagcgctctaagaaccactaccagaaacgagcctaccagtgtatcaagtgcatggtg
gctctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctgaag
cgtaagtggacgtgggcggtggagtggctgggggacgagctggagaggaggccctacaca
gggaacccccagtacacctacaacaactggtctccccctgtccagagcaacgagacttcc
aacgggtatttcctggagcgctcgcattccgcacgcatgaccctggccaaggcctgcgaa
ctttgccccgaggaggtacggaaggagccagatgatcaggaggcaacagaagatcacgac
tcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgccacgcagttt
cagcagcagaacaaccacccccacgcacagccctatacgggtccggctgcccagcacatg
aacacgccccagcggcccccacagagagcacaggagagctgggagagcaccacagaggag
gtggggcccgtggcgctcccgcccgctgtccagacgacaaaagagtaa
DBGET
integrated database retrieval system
