Oncorhynchus nerka (sockeye salmon): 115132220
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Entry
115132220 CDS
T07952
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132220
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115132220
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115132220
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115132220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115132220
NCBI-ProteinID:
XP_029520479
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Position
LG7:complement(43728599..43742799)
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AA seq
483 aa
AA seq
DB search
MREWSESEMTMSAGGYLSAFDGYGISEPLQYYDVLGDPLGYSFQEPDLQGLAFSQQQYSP
VNLQFSVYEPPSSQPCHPPYTHPYSPHFLEAPCEPSPEPQCGGLGKVGGGGLPLVKRTRL
GPGGWVRGLDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMY
MRRKCQDCRLRKCRAVGMLDECLLTEVQCQSKRLRKGAKHRGGGPEEEENMESRSVSSTN
RLLGHVVSANLSREQNHVLDRIVEALRQYRAQYTVHCRVFEWTCTEDGGDRLMDVASPPS
QRLLQFAKSVPGFELLNCSDQSTLLSSSSVEVMFLLSAQQFTQNPAACSPALQPFNISSH
HCLKMKENIHSGTGPVNSGINEDLLGPVINFFHSMAALGVTEAEYALLTATVLLCSADEA
SLRAVTCVESLQELILELLSRVCGAWCGAQGPQGAQRFARLLGRLTELRTLQHNHLTLLR
QQP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagatgaccatgtctgccggtggttacctctctgccttt
gatggatacggcatctccgagcctctgcagtactacgatgtgctaggggaccctttgggc
tactctttccaggagccagacctacagggcctagccttcagccaacagcagtacagcccc
gtcaacctgcaattctctgtctacgaaccaccgtcctcccagccgtgccacccaccctac
acccacccctacagcccccacttcctggaggctccctgcgagcccagcccagagccccag
tgtggaggcctggggaaggtgggtggtggaggtctgcccctggtcaagaggaccaggctg
ggccctggagggtgggtgaggggcctggatgagctttgtgtggtgtgtggagacaaagcc
tctggctaccattacaatgccctcacctgtgaaggctgcaaaggttttttccgaaggagt
gtgacaaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatgtac
atgcggaggaagtgccaggactgccgcctgcgtaaatgtcgtgctgtgggcatgctagac
gaatgtctgctgacggaggtgcagtgccagtcaaagaggctgaggaagggagccaagcac
agaggtggagggcctgaggaggaggagaacatggagagcaggagcgtcagctccaccaac
aggctgctaggacatgtggtgtctgcaaatctgtcaagagaacagaatcatgtgctggac
aggatagtggaggctcttcggcagtacagggcgcagtacactgtacactgtagggtgttt
gagtggacttgtacagaggatggtggagacagactaatggacgtggcctcccctccctct
cagaggctgctgcagtttgccaagagtgtacctggctttgagctcctgaactgctcggac
cagagcaccctcctctctagttcctctgtggaagtcatgtttctgctctcagcgcagcag
ttcacccaaaacccggcagcctgtagtccagcactacagcctttcaacatctcatctcat
cattgtctgaaaatgaaggaaaacattcatagtgggactggccctgtaaactcaggaatc
aatgaggacctgctcgggccggtgatcaacttcttccacagcatggcagcattgggggtg
accgaggctgaatatgccctgctcactgctacagtactgctatgctcagcagacgaagcg
tcgctgcgggcggttacgtgtgtggaaagcttacaggagctgatcctggagctgctgtcc
agggtgtgcggagcctggtgtggagcccagggccctcagggagcccagcgcttcgcgcgc
ctgttggggagacttacggagctgcgcacgctacaacacaaccatctcaccctgctccga
caacagccctga
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integrated database retrieval system
