Oncorhynchus nerka (sockeye salmon): 115132224
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Entry
115132224 CDS
T07952
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115132224 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115132224 (trim33)
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115132224 (trim33)
Protein kinases [BR:
one01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115132224 (trim33)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115132224 (trim33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115132224
NCBI-ProteinID:
XP_029520485
LinkDB
All DBs
Position
LG7:complement(43759391..43788013)
Genome browser
AA seq
1204 aa
AA seq
DB search
MADNKGEEDMESASKLNSEPRGEDSGDPELKDVNSVIVIEPDSKEGDDLLSQENVSQMPT
PANVGGGGDASSNSAGAGGAGSTSSSPVGNTNGGTTESSGAGDIAGTSPTFTTEMSPPPT
VPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVPGPNG
QPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSAQMCTSCEDNADTIGF
CAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVSASGQRPVFCPVHKQEPLKLFC
ETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMSKLQEKKTYVHYSHAHVTSRL
KEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIANLARQ
ILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPTFWAK
NVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQQAFA
QQKQQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPPMVQQQPPRLISMQAQQ
RGPMNGGPLMYPPHHMRLAPGQGRMPSPSAQPRMPNGQQYPAMMQPQLQRQLTIDSEMSH
HRFRLLHLTGHSNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIEL
IPSVTNPENLPCLPDIPPIQLEDAGSSSLDALLSRWISASTYPQLGLWPPVDMNPSPGLS
THSPGSSGLSNSHTPVRPSSTSSTGSRGSCGSAGRPVPASAPMEQQVKVKQEPGIEKDCG
FSGTTTSNVKTERVKDGGRSACMMSSPEISRTPPLPVLGSVASASSVQDALKKLGEHVKT
EPQDQEACSGANGPSKAPSTSPSTKASDSKGAGPATLRTPRTAMGTNQSGAGGKDDDPNE
DWCAVCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYEPDDEP
RGEKDTSEQGLSPEDQRRCERLLLNVFCHELSEGFQEPVPPSIPNYYKIIKKPMDLTLVK
QKLQLKHVQHYQSPIEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAQAGK
AVSLYFEERLLELYPDKSFPEVPEEPEAPVGEGEEADLTEDSEDEFVQPKRKRLKTDEKM
LHIK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagcgcttccaaattaaattcagaacca
cggggagaggatagcggggaccccgaattgaaagatgtgaattcggtgattgtcatagag
cccgattcgaaagaaggagatgatttactatcccaagagaatgtttctcagatgcctaca
cccgctaacgttggtggaggaggggacgcaagcagcaacagcgcgggcgcagggggggca
ggcagcacaagcagtagcccagttgggaacaccaatgggggtacaactgagtcatcgggt
gctggggacattgctggaacctcaccaacattcacaaccgaaatgtccccaccgccgacg
gttccaccagccaaccccgtcaccccaataaaccttatggatacgtgcgctgtgtgtaaa
caaagtctccagacccgtgactgtgaacccaaactattaccgtgtcttcactcattttgc
ttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgcccgggccgaacgga
cagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgtcaagactgcaaa
cagagcgacatcattgacaactactttgtcaaggacactaccgaggcctccaacacttca
gatgaaaaatctgcacagatgtgcaccagttgtgaggacaacgcagataccataggcttc
tgtgcagaatgtggagagtggttgtgcaagacctgcatcgaggctcaccagagggtcaaa
atcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggagtctgtaagtgcg
tcgggtcagagacctgtgttctgtcctgtccacaaacaggagcccctgaaactcttttgt
gaaacctgtgacacactcacctgtcgggactgccaacttctggagcacaaggagcacagg
taccaatttctggaggaggccttccagaaccagaaaggcttcattgagacacatatgtcc
aaattgcaggagaaaaagacctatgtccactactctcacgctcacgtgacaagcaggcta
aaggaagttactgagacccataggaaggtggagcatgagatcaagatagctgtgtttact
cttatcaatgaaatcaacaagaagggcaagtgtttactgcagcaacttgagagtgtgact
aaggagaggagcatgaagctgttttcccagcagacagacatcgccaacctggccaggcag
atcctccacgtgctcaactttacccactctgccattaacagcggcagcagcaccgccctg
ctttacagcaagaggctgatcatctaccagctgcgcaaggttctgaaggctggactggaa
ccagtgcctcaggctaatggttctgttcgcttcttctgtgaccccacattctgggctaag
aatgtggtcaacctagtagggaacctggtgattgagaagatgccccaggctcagcaccct
cccaacattatggtggggcccatctccccgggccatggccacccaggccacggaaaacac
ccagggcagatcaacctggctcagctccggctgcagcacatgcagcagcaagccttcgcc
cagcagaaacaacagcagcagcagcaccaacaaccacaccagcaacaacagcagcaccaa
cagaggatccaggagcagatgcgtattgcttcccaaatgtcccagcagcaccctaggcag
ggtggacctccgatggtacagcaacagcccccgcgcctcatcagcatgcaggcccagcag
aggggccccatgaacggcggtcccctcatgtaccccccccaccacatgcgcctggccccg
ggacagggccgcatgcccagccccagcgcccagccacgcatgcccaatggccagcagtac
cccgccatgatgcagccccagctgcagagacagctgactatagattctgagatgagccac
cacaggtttcgtttgttacatctaacagggcattctaacccaggtcatgctggacccttc
ccagtggcctctctccacaacgtgagcgctgccaaccccaccagtcccaccagtgccagc
atggctagtgcccatgcccaccgtggccccgccagccccatagtgggtgcaattgagctc
ataccctctgtcaccaacccagagaacctgccctgcctaccagacatccctcccattcag
ctggaagatgcaggctccagcagtctggacgccctcctgagtcgctggatctcagccagc
acataccctcagctgggcttgtggccccccgtggacatgaacccctccccgggactctcc
acacactcacctggctcctcaggcttatcaaactcccacacgcccgtgcggccatccagt
acttccagcacaggaagcaggggcagctgtggctctgcggggaggccagtgccagcgagc
gccccaatggaacagcaggtcaaagtcaagcaggagcccggaattgagaaggactgtggc
ttctcaggaaccaccacctccaacgtcaaaacggaacgagtgaaggacggagggaggagc
gcgtgcatgatgagtagtccagagatcagccggactccccctctccccgtgctgggctcc
gtggcttctgcctcctctgttcaggacgccctcaagaagttgggggagcacgtcaaaact
gagccccaggaccaggaggcctgcagcggggccaacgggcctagcaaagcccctagcacg
agcccatccactaaggcctcagacagcaagggagccgggcctgctaccctgcgaactcca
cgcactgcaatggggaccaaccagagcggggcgggagggaaggatgatgaccccaacgag
gactggtgtgccgtgtgcaacaacgggggagagctgctttgctgtgaccgctgccccaaa
gtcttccacatcacctgtcacatccccaccttgaagtgctccccgagtggagagtggatg
tgcacgttctgccggagcctggccagcccggagatggagtacgagcctgacgacgagcct
cgtggcgagaaagacaccagtgagcagggcctgagtcctgaggaccagaggaggtgtgag
cgtctcctgctgaacgttttctgccatgagctcagcgaggggttccaggagcctgtccct
ccctctatccctaattactacaaaatcatcaagaagcccatggacttgaccctggtgaaa
cagaagctacagttgaagcacgtccagcactaccagagccccatagagtttgtctcggac
gtgcgcctggtcttcagcaactgtgccaaatacaacgagatgtctcgaataatccaggta
tatgatgaggagaaacagagtaatgtgcaggcggactcagaggtggcgcaggcagggaaa
gccgtgagtttgtactttgaagagaggctgctggagctatacccagacaaaagtttccct
gaggtaccagaggagccggaggccccagttggagagggagaggaggcagatctcacagaa
gactcagaggatgagtttgtgcagcctaaacgcaagcggttaaaaacagatgaaaagatg
cttcacatcaagtga
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integrated database retrieval system
