KEGG   Oncorhynchus nerka (sockeye salmon): 115132225
Entry
115132225         CDS       T07952                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115132225 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115132225 (bcas2)
   03400 DNA repair and recombination proteins [BR:one03400]
    115132225 (bcas2)
Spliceosome [BR:one03041]
 Complex B
  Other components
   Prp19 complex
    115132225 (bcas2)
 Complex C
   Prp19-CDC5 complex
    115132225 (bcas2)
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115132225 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36
Other DBs
NCBI-GeneID: 115132225
NCBI-ProteinID: XP_029520492
LinkDB
Position
LG7:complement(43799245..43804837)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcaggaacttcatcagtagctggtgaagtatttgtcgatgccctaccatattttgac
cagggttatgatgcagcgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagagactagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcgc
attgagaacctggaacttatggcacactacggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggctcaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcatggtgatgagaacaaggaaaac
attcgacaggacttctag

DBGET integrated database retrieval system