Oncorhynchus nerka (sockeye salmon): 115132277
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Entry
115132277 CDS
T07952
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115132277
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115132277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
pre-PUA_NIP7
Sulfotransfer_2
SAE2
Motif
Other DBs
NCBI-GeneID:
115132277
NCBI-ProteinID:
XP_029520603
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Position
LG7:46786722..46792739
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AA seq
331 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSPLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDFETVLVDACSHVAREADDGCRRPIDRLLTIWQERSLYKAE
FIQQLKLAIEDSNSPQHQPTEEKKAPKRTYQKMIQEPEEEEEDDYRGNMSPQNSDFSGPQ
LTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACL
LLAEYNGRLAAELEDRRQLARMLTEYIGSQKEALTEREKKLEEYKQKLARVTQVRKELKS
HIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttttctgagtctgcgttggagaagaagctttcggagctcagcaactctcag
caaagcgtacagacgctgtctctgtggatcattcatcatcgcaaacactcgccgctcatc
gtcaaagtatggcacagagaactgaagaaagcaaaaagcagcaggaagttgactttcctg
tatcttgccaatgacgtgattcaaaacagcaagaagaaaggtccagagttcgccaaagac
tttgagacagtccttgttgacgcttgctctcatgttgcaagagaggcagatgatggctgt
agaaggcccatcgacaggctgctcactatctggcaggagcgcagcctctacaaggcagag
ttcatccagcagctgaagctcgctatcgaagactcaaacagcccccaacaccaacccaca
gaggagaagaaggcccctaaacggacctatcagaagatgatccaagagccggaggaagag
gaagaagatgactacaggggcaacatgtccccacagaattcagacttctcagggccacag
ctgacggaggagctggtcaaagccctgcaggacctggagaatgcagcctcgggtgatgct
gcggtgcgccagaagattgcctctctgccacaggaggtgcaggatgtgtccctgctggag
aagatcacagataaagaggcagctgataaactgtccaagacagtggatgaggcctgtcta
ctgctggctgagtataacggacgtctggctgctgagctggaggacaggaggcagctggcg
cgcatgctgacagagtacatcggtagccagaaggaagccctcacagagagggagaagaaa
ctagaagagtacaaacagaagctggcacgagtcacgcaggtgcgcaaggagctcaagtct
cacatccagagcctgcctgacctctctctgctgcccaatgtgacgggaggcctggcccct
ctaccctctgctggagacctgttctccaccgactga
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