Oncorhynchus nerka (sockeye salmon): 115132300
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Entry
115132300 CDS
T07952
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115132300
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115132300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
hSH3
SH3_2
CRAL_TRIO
PH_10
Motif
Other DBs
NCBI-GeneID:
115132300
NCBI-ProteinID:
XP_029520654
LinkDB
All DBs
Position
LG2:complement(1617260..1711661)
Genome browser
AA seq
1251 aa
AA seq
DB search
MRTGESDENMKEKEEKMGERDEMEMRLQSSGHGGGCVHISLEEVKSFYRFSQSCQRLHND
IMQQESDRLFAADIDPDLRKRFAFLSGGRAENGSPIIVFPEFPAFGELQEEEFHNVLTYL
TSVPSVTASGVGFILVIDRRQDRWTAVKGTLLRIAGSFPVHLQLVLVLRPSTLFQRTLSD
IFFKFNRDEFKMKVPVVMLSSVTELHAYIDRTQLPQELGGTQDYCHDTWISHRTAIEAFA
LMVKTTAQTLQSFGTELAETELPNDAQATSNLLATHTEKKGQMKEDLCVALGQGGRLLES
INEPLQREPEYKMNQDELENLATVQRLLGQLDETETAFDDFWERHQTKLEQCLQLRHFEY
YFREVRAQLDVVSERIEAFSEVGISPAHAEHILRELNSQEEKACDVLDWALSLATEGDGL
IESAHYAEDSILPKCSELRAVCDEVTSFLKTKKVLLLRAMELHHCLEKASRWCEEGIYLL
ASQPVDRCQSQDGAEAALQELEKYLDTAAQHQITDLKAIWRDYDSILNPELREQVEKVFQ
KQVSMQEMFEKRRVSLKKLAAKQTRPVQPVAPRPEAIIKFPMSPPAHRSQESRNAEDNIL
NVENCRIVEVQVQNGGSRHGSLSEEEENLAVLRRHVMNELLETERAYVEELLCVLQGYAA
EMDNPAMAHLLPSALLNRKDVLFGNMPEIYQFHKRTFLRELETYTDVPELVGRCFLERMG
DLQIYEKYCQNKPRSESLWRQCSDCAFFQECQRKLEHKLGLDSYLLKPVQRITKYQLILK
ELLKYSKGCEGSEDLQEALSSILGILKAVNDSMHLIAITGYEGSLTDLGRLLMQGSFSVW
TEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREESGEGYEKAPSYSFKHSLNMSVV
GITESAKGDNKKFEIWCNSREEVFIVQAATPEIKTSWLNEIRKVLTGQLKACRESSQKKA
SDTMSPSPTSNSPPICLSPFRNCQKSVKKGEEKKTDAVISDPNSPSSPKHKEETVTSPTT
DRASVAKKRFTLQGFSNLKSQKEFLHPAGKSLTLPMVFSQPGSLLSPDHKAKSHEIKSDP
TPFGCKEPGQTPHITLSRAKWLSTSSLLQAKRRGWNKASFSMDVPEVQDGYSSAEDPMNS
DPEDEGGRKLAVGDRFTVAADYEKEKGGPQDLSVKSGDMVQLIKEGDDGQWFVRNLGSNK
DGWVAAANLLTLITESKSSQSLCSSEGSVTGNLSTSSSCSETYTSFSDIKP
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgggagagagtgatgagaatatgaaggaaaaagaagagaagatgggagagagg
gatgagatggagatgcgtttgcagtccagcggacacggaggaggatgtgtccacatctct
ctggaggaagtgaagagcttctaccgattctcacagagctgtcagcgcctgcataatgac
atcatgcagcaggagagtgatcgtctgtttgctgcagacatcgatcctgacctcaggaaa
cggtttgctttcctctcagggggccgagctgagaacggcagtcccatcatcgtgttccca
gaattccctgcttttggcgagctccaggaggaagagttccacaacgtgctgacctacctg
accagtgtgcccagtgtgacagcgtctggagtgggcttcatcctggtcatcgaccgccgc
caggacagatggaccgccgtcaaggggaccctgctacgcattgcaggctcattcccagtg
catttacagctggttctggtcttgcggccctccaccttattccagcggacgctctccgac
atcttcttcaagttcaacagggatgagttcaagatgaaggtgccggtggtgatgctgagc
tctgtgactgagctccatgcctacatcgaccggactcagctgccccaggagctgggagga
acccaggattactgccatgatacctggatctcacaccgcaccgctatcgaggcctttgct
ctgatggtgaagaccacggctcagaccctgcagtcgtttgggacggagctggccgagacc
gagctacccaacgacgcccaggccacgtccaacctgctggccacacacaccgagaagaag
ggacagatgaaggaggacctgtgtgtggcactgggccagggaggccggctcctggagagc
atcaacgagcccctgcagagagaacccgaatataaaatgaaccaggacgagctggagaac
ctggccaccgtgcagagactgctgggccagctggatgagacagagacggcgtttgatgat
ttctgggagagacaccagaccaagctggaacagtgtctgcagctccgccattttgaatac
tacttccgtgaggtgcgtgcccagctggatgtggtgtcagagcggatagaggcattctcg
gaggttggcatcagtcctgcccatgcagaacacatcctacgagaactcaacagccaggag
gagaaagcctgtgatgtgttagactgggctctgtccctggccactgagggggatgggctg
attgagagtgctcactatgctgaggactccatcctgccaaagtgcagtgagctgagggcc
gtgtgtgatgaggtcacctccttcctcaagaccaagaaggtcctcctcctgagggccatg
gaactgcaccactgtctggagaaggcatcgaggtggtgtgaggaagggatctacctcctt
gcctcccagccggtagatagatgtcagtctcaggacggggcggaggccgcgctgcaggag
ctggagaagtacctggacacggccgcccaacaccagatcaccgacctcaaggccatctgg
agggactatgactccatcctcaacccagagctcagggagcaggtggagaaggtgtttcaa
aagcaggtgtccatgcaggagatgtttgagaagaggagggtcagtctgaagaagctggca
gccaaacagacacggcccgttcagccagtggctcccaggcctgaagccatcatcaagttc
cccatgtcccctcctgctcacaggagtcaagagtcaaggaatgcagaggacaacatcttg
aacgtagaaaactgcagaatagtggaggtccaggtgcagaacggcggcagcagacacggc
tctctgtctgaggaggaggagaacctggctgtgctccgacgacatgtaatgaacgagctg
ttggagactgagagggcgtacgtagaggagcttctctgtgtactgcagggttatgctgca
gagatggacaacccagccatggctcacctcctccctagtgctctgctcaacaggaaggat
gtcctgtttggcaacatgccagagatctaccagtttcacaagaggacattcctcagggag
ctggagacctacacagacgtccctgagctggtgggacgctgtttcctggagaggatgggc
gacctgcagatctatgagaagtactgtcagaacaaacctcgatccgagagcttgtggaga
cagtgctccgactgcgccttcttccaggagtgccagagaaagttggaacacaaactgggg
ttggactcgtacctcctcaagccagtccagaggataaccaaataccagctgatactgaag
gagttactgaagtacagtaagggctgtgagggttcagaggacctgcaggaggcgctgtcc
tccatcctggggatcctgaaggccgtcaacgactccatgcacctcatcgccatcacagga
tatgaggggagcctgacggacttgggcaggctgctgatgcaggggtcgttcagtgtgtgg
acagaacacaagaaaggtcacgctaaggtcaaggacctggcccgcttcaagcccatgcag
agacacctgttcctgcatgaaaaagccctgctcttctgtaagagacgggaggagagcggg
gaaggttacgagaaagccccgtcctacagctttaaacactccctcaacatgagtgtggtg
ggcatcacggagagcgccaagggtgacaacaagaagtttgagatctggtgtaattccaga
gaggaggtgtttatcgtccaggctgcgacacctgagatcaaaacatcttggttgaacgag
atcaggaaggttctgactggccagctgaaggcttgcagggaatctagtcaaaagaaggcg
tcagacacaatgtctcccagtccaaccagcaacagcccacctatctgtctcagtccattt
aggaactgtcagaagagcgtgaagaagggagaagagaagaagacagacgctgtcatctct
gaccccaactccccctcctccccaaaacacaaagaggagaccgtcaccagtcccaccact
gacagggcatcagtggctaaaaagcgttttacccttcaaggcttcagcaatctgaagagt
cagaaagaatttcttcaccctgctggtaaaagtctaacattaccaatggtattctctcaa
ccaggatccctccttagccctgaccataaggccaaaagccacgagattaagagtgaccca
actccctttgggtgtaaagagcctggtcagactcctcacatcactctgagcagggccaag
tggctcagcacctctagtctcttacaggccaaaaggagaggttggaacaaggcctctttc
tccatggatgtgccagaagtgcaggatgggtactccagcgccgaggaccccatgaactct
gaccctgaggatgagggaggcaggaagctggctgtcggcgacaggttcacagtggcggcg
gactatgagaaggagaaaggagggcctcaggacctgtcagtgaagagtggagacatggtg
cagctcattaaagagggagatgatggacagtggtttgttagaaacttggggagcaacaaa
gatggctgggtagcagcagccaaccttctcaccctcatcacagagtccaagtcctcacag
tccctctgcagctcagagggcagtgtaactggcaacctcagcacctcctccagctgcagt
gaaacctacacaagtttctctgacatcaagccctaa
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