Oncorhynchus nerka (sockeye salmon): 115132323
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Entry
115132323 CDS
T07952
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115132323 (apex2)
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115132323 (apex2)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115132323 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
115132323
NCBI-ProteinID:
XP_029520727
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Position
LG7:49208084..49211219
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AA seq
591 aa
AA seq
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MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDSSEFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKHFKLQFYKLLQYRAEAILEAGSHVII
LGDVNTSHRPIDHCDPDYIEDFEDHPGRKWLNGLLVDDSEGKEYEKNNEESENTSSKPLR
SGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLMSSAKLPPLCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRDP
LPGSQETGETRENLNPLGSAGTTSTGMKRKLAVESCVPKSKKIMTLKAATPKPQGNLLAF
FKPKSIPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTPCTEYPQG
VCMGDKVHVPGSNIQDASVNSQNQEKDAALATVDPPCPRKGASLGGFWKTVLRGPPPPPP
CKAHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaacattcaagggcggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagctttagtcgt
ggacgtagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctgaccaccaaccacgaggggaccattggatgttat
ggtgactcgagtgagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagacacacctgaaacagttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacatttcaaactgcagttc
tacaagctgcttcaatatcgggctgaagcaattttagaagctgggagccatgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagag
gattttgaggatcaccccgggaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtatgaaaaaaacaatgaggagtctgagaatacctcatcaaaacccctccgc
agcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactacatc
ttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcatgtccagcgcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcttgcagggaccca
ctaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacttccactggaatgaaacggaagttggcagtggaatcttgtgtcccaaagagc
aaaaagattatgacactgaaggcggctaccccaaagccccagggcaacctcctagccttt
ttcaagcccaaatccatacctgtggccccaaccagggaagaccctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgttccatcaattccaggcacgccgtgcacagaatatccccagggt
gtctgtatgggagacaaagtccatgtaccgggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagccctggctactgtagaccccccatgtcccaggaag
ggggcttcactgggcgggttctggaagacggtcctgcgtgggccacctccaccgcccccc
tgtaaggctcatggggaaccctgtgtactccgcacagtcaagaaggcaggtccaaacatg
ggcaagcagttctttgtgtgtaaccgccctcagggccatgcatccaatcccgaggctcgc
tgtaactacttttcttgggtggataaaggaaaatag
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