KEGG   Oncorhynchus nerka (sockeye salmon): 115132330
Entry
115132330         CDS       T07952                                 
Name
(RefSeq) WD repeat-containing protein 13-like isoform X1
  KO
K24739  WD repeat-containing protein 13
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:one04990]
    115132330
Domain-containing proteins not elsewhere classified [BR:one04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   115132330
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WD40_Gbeta Beta-prop_Aladin ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_EMC1_N RPOC_hybrid
Other DBs
NCBI-GeneID: 115132330
NCBI-ProteinID: XP_029520745
LinkDB
Position
LG7:complement(49330444..49337643)
AA seq 504 aa
MASKIADICPGRGFPSTLTVCGMAAVWQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLL
RENAKCGFEPGLRRHYLRLRSQLLALRYGPLSEQSSFRASSVRSSRTTLDRMEDFEEDPR
AQGARGHRRSVSRGSYQLQAQMNRAVYDERTPGALVPTSVAEASRAMAGDTTLSENYAFA
GMHHIFDQHVDSAVPRLQFANDDKHLLACCSLDGTLSIMILSPSPPSVKVVLKGHAGPVT
DFAWSLSNDVIVSTSKDGTLRIWNTEDGRCIREVRDPEASELLCCTFQPMNNNLTVVGNS
KHLLQVVNISTGKKVKGGSSKLTGRVLSMSFDAPGRILWAGDDRGSVFSFLFDMATGKLT
KAKRLVVSEGSPICSISARSWISREARDPSLLINACVNKLLLYRVVDNEGTLQLKRSFPI
KHGSQPLHSIFCPLMSFRQGACVVTGSEDACVYFFDVERNTKAIVNKLQGHGGPVLDVSF
NCDESLLASADSTGMVIIWRREQK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggctagcaagatagctgacatctgccctggccgtggcttcccctctaccttgactgtt
tgtggaatggctgcagtttggcagcaggtgttggcagtggacgcaaggtacaatgcatac
cgcacgcctacgttcccacagttccgcacgcaatacatccggcggcgcagccagctactc
agggaaaacgccaagtgtggctttgagccggggctgcgcaggcattacctgaggctgcgc
agccagctgctagccctgcgctacgggcccctgtctgagcagagcagcttcagggccagc
agtgtgcgcagctcccgcaccacactggaccgcatggaggattttgaggaggacccccgt
gctcagggggctcgtggtcaccgtcgatctgtgagcagaggctcctaccagcttcaggcc
cagatgaacagggcagtctatgatgagaggaccccaggtgccttggtgccaacctctgtg
gcggaagctagccgtgccatggctggggacaccactctgagcgagaactatgcttttgct
ggcatgcaccacatattcgaccaacatgtggactctgcagttccacggctgcagtttgct
aatgatgacaagcacctcctagcctgctgctcattggacggcaccctgtccatcatgatc
ctgtccccgtccccgcccagtgtgaaggtcgtcctgaagggtcatgcaggtcccgtcacc
gactttgcttggtcccttagcaacgacgtcatcgtgtcaacatcaaaggatggaacactg
cgtatttggaacacggaagatgggaggtgtatccgtgaggtcagagacccggaagctagc
gaactgctttgctgcaccttccagcccatgaataacaacctcacagtggtagggaacagt
aagcacctcctgcaggtggtgaacatctccactgggaagaaggtgaaggggggttccagt
aagctgacgggacgggtactgtctatgtcctttgatgcccctgggaggatcctgtgggct
ggggacgacaggggcagcgtcttctccttcctgtttgacatggccacagggaagctgacc
aaagccaagcggcttgtggtgagtgagggcagcccaatctgcagcatatctgcccgctcc
tggatcagcagagaggctcgagacccctccctgctgatcaatgcctgtgtcaacaaactg
ctactctacagagtggtggataatgaaggcactctgcagcttaagaggagcttccccatc
aagcatggctctcagccccttcacagcatcttctgccctctcatgtccttcagacagggc
gcctgtgttgtgactggcagtgaggatgcctgtgtctacttcttcgacgtggaacgcaac
actaaggccatagtcaacaagctgcagggtcacggtggcccagtgctggatgtcagcttc
aactgtgacgagagcttgctggcttctgcagactccactggcatggttatcatctggagg
cgggagcagaagtga

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