Oncorhynchus nerka (sockeye salmon): 115132428
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Entry
115132428 CDS
T07952
Symbol
ints11
Name
(RefSeq) integrator complex subunit 11 isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115132428 (ints11)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
115132428 (ints11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IntS11_C
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
115132428
NCBI-ProteinID:
XP_029520926
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Position
LG7:52686506..52694524
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AA seq
603 aa
AA seq
DB search
MPEIKVTPLGAGQDVGRSCILVSIGGKNIMLDCGMHMGFNDDRRFPDFSYITQQGRLTEF
LDCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICPILLEDFRKITVDKKGETNF
FTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHVLGAAMVQIKVGSESVVYTGDYN
MTPDRHLGAAWIDKCRPDVLISESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVF
ALGRAQELCILLETFWERMNMKAPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQRNMF
EFKHIKAFDRSYADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMIIMPGYCVQGTIG
HKILNGQKKLEIENRQTLEVKLQVEYMSFSAHADAKGIMQLIRMAEPRNMLLVHGEAKKM
EFLKDKIEQEFTINCFMPANGETTTVITNPSVPVDISLNLLKREMALGGPLPDPKKPRTM
HGTLIMKDNSLRLVSPEQALKELGLNEHQLRFTCRVQLQDPHSDPDTLSRIYTHLKSVLK
GYTIQHLPDGTVMVESIVIKVSSSTEEPNTKVLLLSWSYQDEDLGSFLSTLLKKGLPSGL
SSM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagataaaagtgacaccactgggtgctggacaagatgttggccgtagctgcatc
cttgtctctattgggggcaaaaacattatgcttgactgtgggatgcacatgggcttcaat
gatgacagaagattcccagatttctcttacataacacaacaaggacgcctgacagaattc
ttggactgtgtaattatcagtcatttccacttggaccactgtggtgctctgccgtacatg
agtgagatggtgggctacgatggccccatctacatgacccaccccaccaaggccatctgc
cctatcctgctggaggacttcaggaagatcactgtggacaagaagggcgaaaccaacttc
ttcacatcccagatgatcaaggactgcatgaagaaagtagtccctttgaacctccaccag
actgtccaggtggatgatgagctggagatcaaggcttactatgcaggccacgtcctagga
gctgctatggtgcagatcaaagtaggatctgagtctgtggtctacactggtgactataac
atgacgccagacagacatttaggggctgcgtggatcgataagtgtcggccagacgtcctc
atctcagagtccacctacgccaccaccatccgtgactccaagaggtgcagggagagggac
ttcctgaagaaagtacacgagacagtggagagaggggggaaggttctgattccggtcttt
gccttgggtagagctcaggaattgtgcattctattggaaacattctgggagcggatgaac
atgaaagcacccatctacttctccacggggctcacagagaaagccaatcactactacaaa
ctcttcatcacctggaccaatcagaagatcagaaaaacctttgtacagagaaacatgttt
gagttcaaacacattaaggcctttgatcgctcctacgcagacaatcctggaccaatggtg
gtatttgccaccccaggaatgttgcatgctggtcagtctctacagatattcaaaaagtgg
gctggcaacgagaagaatatgatcatcatgcctgggtattgtgtgcaaggcaccatcgga
cacaagatcctgaatggtcaaaaaaaactggagatagagaatagacaaacgttggaggtg
aagctgcaggtggagtacatgtcgttcagcgcccatgcagacgctaagggcatcatgcag
ctcatccgcatggcagagcctcgcaacatgctgctggtgcacggagaggccaagaagatg
gagttcctcaaggacaagatcgagcaggagttcaccatcaactgcttcatgccagccaac
ggtgagacgaccactgtgatcaccaaccccagtgtcccagtagacatctcactcaacctg
ctcaagagggagatggcccttggaggccccttacctgacccgaaaaagcctcgtaccatg
cacgggaccctgatcatgaaggataatagtcttcgtctggtctctccagaacaggctctc
aaggagttgggcctcaacgagcaccagctccgcttcacctgccgagtacagctccaggac
ccacacagtgaccccgacactctcagcagaatctacacacacctcaagagtgtgctgaaa
ggttataccatccagcacctcccagatgggaccgtcatggtggagtccattgtgatcaag
gtgtcctcctcaactgaagagcccaacaccaaggtgctgctgctctcctggagctaccag
gatgaagatctggggagctttctgtctactctgctgaagaaaggacttccatcagggctg
tcttcaatgtga
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