Oncorhynchus nerka (sockeye salmon): 115132482
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Entry
115132482 CDS
T07952
Name
(RefSeq) homeobox protein Hox-C10a-like
KO
K17444
homrobox protein Hox-C10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115132482
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115132482
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115132482
NCBI-ProteinID:
XP_029521027
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All DBs
Position
LG7:complement(54774172..54779224)
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AA seq
343 aa
AA seq
DB search
MSCQDNIVASHFLMDSLMGGSSSSYRGEGFSGSNPGMYIHSAASEYGCSMMRHFGVVGSP
LPKKDEVPPSSHPLGSYQDALYLSSQLGTWTSVSKTNSDEQPVAQSSLQPCSFPIDNVKK
EAFCCLYQGDSSSRANTDNTESATYIRLGNNSSSQTDQTAVSEVSECYGGVRRVYPGESR
GQREEQFGTGFASLAPVTTSVESPRESTVNKSTQEKVSEETGIEEEEQRKRKKEESAKTD
SCSDNSDELKDDFTLENAPGNWLKAKTGRKKRCPYTKHQTLELEKEFLFNMYLSRERRLE
ISKSIDLTDRQVKIWFQNRRMKLKKLNSESRGRDHLMAAYNFT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgccaggataacattgttgccagtcatttcctgatggattctttgatgggagga
tcatcttcttcctatagaggcgagggcttctccggcagcaacccaggaatgtacatccac
tcggctgcatctgagtatggatgctcaatgatgagacattttggagtagttggatcgccc
cttcccaaaaaagacgaggttcctccgagtagccaccctctcggctcctaccaagatgcg
ctttacctgtcatcccaactgggcacttggacctctgtttctaaaactaacagtgacgag
caacctgttgcccagtccagtttacaaccgtgttcgtttccaatcgacaacgtcaaaaag
gaggcgttctgttgtctgtatcagggtgacagtagcagcagggctaatacggacaataca
gagtcggctacttacattcggcttgggaacaatagcagcagccagacggaccaaaccgct
gtctcggaggtgtccgaatgttatggaggagtaagacgggtatacccaggagagagcagg
ggacagcgagaggagcagttcgggacagggtttgcgtctttggccccggtgacgacatct
gttgaatcaccaagagaatcaacggttaacaaatctacgcaggagaaagttagcgaggaa
acaggcatcgaagaggaagaacagcgaaagcgcaagaaagaagagagtgcaaagactgac
agttgttctgataactctgacgaattgaaagatgattttacattggaaaatgctccagga
aactggttaaaagccaaaactggacggaagaagagatgcccgtacacgaagcatcagacg
ctcgagctggaaaaggagttcttgtttaacatgtatctgtctcgcgagcgccgtctggag
atcagtaagagtatcgatctgaccgatagacaggtaaagatctggttccagaaccgaagg
atgaagctcaagaaactcaatagtgaaagtcggggtcgggatcatcttatggcggcctac
aacttcacctga
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