Oncorhynchus nerka (sockeye salmon): 115132500
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Entry
115132500 CDS
T07952
Name
(RefSeq) extended synaptotagmin-1-like isoform X1
KO
K28063
extended synaptotagmin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115132500
Membrane trafficking [BR:
one04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
115132500
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
C2_GRDP
cPLA2_C2
PDZD8_N
MP_p6
Motif
Other DBs
NCBI-GeneID:
115132500
NCBI-ProteinID:
XP_029521058
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Position
LG7:55317275..55360488
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AA seq
1087 aa
AA seq
DB search
MPAVDGSPSMGTGSGAADSALPEEMQPPKPPGQHAVTVLWSFGKFLATLLPVYLAGYFGF
SISLVLFGLMVYIGWKHSKNEKVMRLRSAMFVLENERAYTTARAFMSKQELPPWVNFPDV
EKVEWMNQILQQAWPFVGQYLEKLLVETITPAIRASNTHLQSLSFTTVNLGEKAMKVVGV
KAHTEHDKRQVLLDLYISYAGDVEINVEIKKYFCKAGVKGIQLHGKLRVILEPLIGDVPL
VGAITMFFIRRPKLDINWTGLTNMLDIPGLNAMSDTMIMDAIASYLVLPNRLTIPLVADL
HVAQLRSPLPRGVVRIHLLEAEELTAKDTVIKGIIDGKSDPYAVLRVGTQTFTSHTVDSN
LNPQWREMFEVIVHEVPGQELEVEVFDKDQNQDDFLGRVKMDLDVIHKARVLDEWLKLKD
VTSGSVHLRLEWLSLLSSADRLSEVIQRNQNMTCKTGDPPSAAILSVYLDRAQDLPRKKG
NKDPSPMVQLSVQNTTKESRICYLTSDPVWEDAFTFYIQDPRKQELDIHVKDDDRALSLG
SLSIPLTRLLASPDLSMDQWFQLDKSGRIYINAVLRVLHLNEDASLTSSVSPHLPSPGAG
HRDGGTTSEVALGGVGGAPKPEPTRPQQTTPDSDFASEGVLRIHLAEASNLIAKDNFIGG
MVKGKSDPYVKIRVAGVTFRSHTIKENLNPSWNELYEIILTQLPGQEIQFELFDKDLDQD
DFLGRFKLNLQDIISPQFTDEWYTLNDVKSGRLHLVMEWLPTVSESARLNQILQYQAQQQ
YQNKAVPSAAVLFVYLERAHGLPLKKNGKEPNVGAEISLRAMTYKTKVCECSTSPRWDEA
FHFLVRDPTEELLIVKLSHSWGQAMGTVVLPLREVLSEQGLVLDRWLSLDGALPESQILL
RATLKMLNTQLAVCPSGVSSDTTGECSEERDHVIHRRDTEPNLRHRSPLSQLGGQSPGQV
KLQIGYSTEENRLYITVLSCRGLPACVSAKDSSDPYVSFILLPDKNRTTKRKTITKKRDL
NPEFNERFDFDFTLEECMQRRLDLTVKNNISFMSRERELIGKLQLDLDQIDLQNSDTQWY
DLVEETN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgtggatggaagtccgagtatgggcacaggctcgggggctgcggactcggca
ttgccagaagaaatgcagccacccaaacctccagggcaacatgctgtaaccgtattgtgg
tcctttggaaagttcctggctacacttttaccagtttatttggccggatacttcgggttc
agtatcagcttggttctattcggtctcatggtctacatcggatggaaacacagcaaaaac
gagaaagtcatgcgtctgcggtcagctatgttcgtattggagaatgagagagcatacacc
actgcgagggcttttatgagtaaacaggaattacccccatgggtcaacttccctgacgtg
gagaaggttgagtggatgaatcagatcctgcagcaggcgtggccattcgtgggtcagtat
ctggagaagttgctggtcgagaccattactccagccatacgtgcatccaacacccacctg
cagagcctcagcttcaccacagtcaaccttggggagaaggccatgaaggtggtgggagtg
aaggctcacacggagcacgacaagcggcaggtcttactggacctatacattagctatgca
ggtgatgtggagatcaatgtggaaatcaaaaagtacttttgcaaagcaggagtgaaggga
atacagctacatgggaagttaagggtgatcctggagcccctgattggggatgtgcctctg
gtgggagccatcaccatgttcttcatccgcagacctaagctggacatcaactggacgggg
ctgaccaacatgctggatatccctggactcaatgccatgtcggacactatgataatggat
gctatagcctcatacctggtcctccccaatcgcctcactatccccctggtggccgacctg
cacgttgcgcagctccgctcccctctcccacggggagtggtgcgtatccacctgttggaa
gctgaggagctgacagccaaggacacggtcattaaggggataatagacggaaagtctgac
ccgtacgctgtgctgcgtgtgggaacccagaccttcacatcacacaccgtggacagcaac
ctcaacccacagtggagagagatgtttgaggtgattgtccatgaagtgcctggtcaggag
ttggaggtggaggtgtttgataaagaccagaaccaggatgacttcctgggcagggtcaaa
atggatctagatgtcatacacaaggccagagttctagatgagtggttgaagctgaaggat
gttacatcaggcagtgttcacctccgtctggagtggctctctctgctgtcctctgctgac
cgactcagtgaggttatccagaggaaccagaatatgacctgtaagactggagaccctccc
tctgcagccatcctgtctgtctacctggaccgtgctcaggacctgcctaggaagaagggc
aataaggaccccagcccgatggtgcagctgtctgtacagaacacaaccaaggagagtagg
atctgttatctgacctctgaccctgtgtgggaagatgccttcaccttctatatccaggac
cctcgcaaacaggaacttgatattcatgtgaaggatgatgaccgggctctgtctctgggc
agtctgtccatcccgctgacccgtctgctggctagtcctgacctcagcatggatcagtgg
ttccagctggacaaatctggccgcatctatatcaatgctgttctgagggttctgcattta
aatgaggatgcctctcttaccagttccgtatctcctcacctcccaagcccaggggcaggc
cacagagacgggggtaccacgtcagaggtagccctcgggggagtgggtggagcccccaaa
cctgaacccacacgaccccaacagaccacccctgactcggacttcgctagtgagggagtg
ctgcgtatccacctggcggaggccagtaacctgatagccaaggataacttcatagggggc
atggtgaaggggaagagtgacccctacgtcaagatcagggtggcaggagtcaccttccgc
agccacaccatcaaagagaacctgaacccctcctggaacgaactctacgagatcatctta
acccagctgcctggtcaggagatccagtttgagctgtttgataaagatctggaccaggat
gacttcttggggaggttcaagttaaacctgcaagacatcatcagcccacagttcactgat
gagtggtacactctgaatgatgtgaagtcaggtcggcttcacctggtcatggaatggctc
cccacggtctcagagtccgccagactaaatcagatcctgcagtaccaggcccagcagcag
taccagaacaaggcagtcccgtcggctgctgtgttgtttgtgtacctggagagagcccac
ggcctgccgttgaagaagaatggaaaggagcccaacgtcggggcagagatttcgctgagg
gccatgacatacaagaccaaggtgtgcgagtgctctacgtctcctcggtgggatgaagct
ttccacttcctggttcgtgaccctacagaggaactccttatagtgaagctgtcccacagc
tggggccaggccatgggcacggtggtgttgcccctgagagaggtgctgtcagagcagggc
ctggtgctggaccgatggctgagtctggacggggccctcccagagagccagattctactg
agggccacactcaagatgttgaacacccagctggcagtgtgtcctagtggtgtgtccagt
gatactactggggagtgcagtgaggagagagaccatgtcatccacagacgggacactgaa
ccaaacctccgacacagatcaccgctctctcaattaggtggtcagagccctggtcaggtg
aagctgcaaattggctactcaacagaggagaacaggctgtacatcaccgtcctctcctgc
aggggcctgccagcttgtgtgtctgctaaggacagctccgacccatatgtctcctttatc
cttctgccggacaagaacaggaccaccaagagaaagaccatcaccaagaagagagacctc
aaccctgagtttaacgagaggtttgactttgacttcactctggaggagtgcatgcagaga
agacttgacctgactgtcaaaaacaacatatccttcatgagcagggagagagagctcatt
ggaaagttacagctagatcttgaccagatagacctgcagaatagcgacacacaatggtac
gatttagtagaggagaccaattag
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