Oncorhynchus nerka (sockeye salmon): 115132532
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Entry
115132532 CDS
T07952
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115132532
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
115132532
NCBI-ProteinID:
XP_029521133
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Position
LG7:complement(57206078..57233335)
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AA seq
817 aa
AA seq
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MGILTHCVLLFLFQHLTSAYNFKGLDNGQYAFVKDPSLNIEKRTADVELFQFDSESAEHI
RSRRSADQEDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVPFF
MLRFAQSKLYRSENYGKSFQDVTNLIKNTFIRTEFGIAIGPENSGKVILTGDMSGSLGSR
IFISRDFGNSFEQQDLPFNPLMQITYNPRDANVLLVISNTDDLWLSEDFGENWRKIHDMV
CLFKWGMDSNIFFTTSLNGSCNDMGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFASV
MTGTGTLRRIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGYGSIY
VSDDRGTVYSKSLERHLYTTTGGDTDFTNITSLRGVFITSILAEDGLVQSVVSFDQGGEW
VPLQKPANTKCDSTAKDPDKCSLHIHAAYSAAMKLNVPMLPLSEPNAVGLIMAHGSVGDA
ISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDIKFSTDEGQCW
HVHQFTSDPIHFTGLAVEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEDQDY
VQWLAHSDDISDPNDGCMLGYKEKLLRLRKASVCWNGRDYVVNKQPTPCLCTLDDFLCDF
GYYRKENSSECVEQPDLKGHLLEFCLQGKEELLQTRGYRKIPGDKCEGGKEPERKEIDLS
KRCVSDLLGPQELLMDGHLSSSAPIIVTVLIIVLLAIIAGVLIVKKYVCGGRFLVHSYSV
LQHHAEAQGLDEPLDSNFTQTRNMADFHDDSDEDLLE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgcactgtgttttactttttttattccagcatttgacgtccgcttat
aattttaaaggactagacaatggacagtatgcatttgtgaaagatcctagtttgaatatc
gaaaagagaactgcagatgtagaattattccagtttgactctgaatcagccgaacacatt
cggagcaggagaagcgctgatcaagaggactgtaaaagtctccagggattcgacaccaag
ttgactaacaacacccacacctattccttcaatgacctgagtgggtccgtgtcactggcc
tgggttggagacgccaccggggtcatcctggctttgacaacattccaggttccattcttc
atgttgagattcgcccagtccaaactctatcgaagtgagaactatgggaagtcgttccag
gatgtcacaaacctcatcaaaaacactttcatcaggacagagttcggcatcgccatcgga
ccagagaactctgggaaggtgatcctgacaggtgacatgtctggcagcctgggatctcgt
atctttatctccagagactttgggaacagctttgagcagcaggaccttcccttcaacccc
ctgatgcagatcacatacaaccccagagatgccaacgttctcctggttatcagcaacact
gacgatctctggctgtcagaggactttggagagaactggaggaagatccatgacatggtg
tgtctgttcaaatgggggatggacagtaacatattcttcaccaccagcctcaatggatcc
tgcaatgacatggggatgctggacttgaggaggacgacggactacgggaagaccatcaag
actgttgccactaagatcttctctttcggcctggggggaaagtttctgtttgcctctgtt
atgactggaactggcactctgagaaggatccatgtgtcgactaaccagggggaggagtgg
aacatggctcagctgcctccggttggccacgaggagttctattctatcctggcagccaat
gaggacatggtgttcatgcacgtggacgaaccaggagacacaggctacggcagcatctac
gtgtcagacgacaggggtacggtgtactccaagtctctggagcgtcacctctacaccacc
acagggggagacactgacttcaccaacattacctctctacgaggggtcttcatcaccagt
atactggcagaggatggcttggtgcagtccgtggtgtccttcgaccagggaggggaatgg
gtgcccctgcagaaacctgccaacaccaagtgtgactccacagccaaagatcccgacaag
tgcagtctccacatccacgcagcttacagcgcggctatgaagctgaacgtccccatgctg
cctctcagtgaaccaaacgctgtaggactcatcatggctcacgggagtgtgggcgatgcc
atctctgtgatgaagccggacgtattcgtgtcagatgatggaggttacacctggctacag
gcccttgagggacctcaccactatgccatcctggactctggtggactcctggtggccgtg
gagcactctgctcagctcatcaaagacatcaagttttccacagacgagggccagtgctgg
cacgttcaccagttcaccagcgatcccatccacttcacagggctagcggtggagccgggg
gcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtactgg
gtatctgtcaccgttgacttccgagagctgctcactagaacctgtgaggaccaggactac
gtgcagtggctggcacactctgatgacatcagcgaccctaacgacggctgtatgctgggt
tacaaagagaagttactgcgtctaaggaaggcctcggtctgctggaacggacgggactat
gtggtcaacaagcaacccaccccctgcctctgcaccctggatgactttctgtgtgacttt
gggtactatcgtaaagagaacagctctgagtgtgtggagcagccggacctgaagggccac
cttctggagttctgtctgcaaggcaaggaggagctactgcagaccagaggctataggaag
atccccggggataagtgtgagggaggaaaagagccggagagaaaagagatcgacctcagt
aagaggtgtgtcagtgatctgctgggacctcaggaactactgatggacggccatctgtcc
agctctgcacccatcatagtgactgttttaatcattgtgctgctcgcaatcatagctggg
gtcctcatcgtcaagaagtatgtctgcggtggcaggttcctggtacacagctactctgtc
ctacagcatcatgctgaggcccagggactagacgaacccctagacagcaacttcactcag
accagaaacatggccgacttccacgacgattcagacgaggatcttctggagtaa
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