Oncorhynchus nerka (sockeye salmon): 115132633
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Entry
115132633 CDS
T07952
Name
(RefSeq) protein SOGA1-like
KO
K27704
microtubule cross-linking factor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115132633
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115132633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
PIN_12
YabA
Motif
Other DBs
NCBI-GeneID:
115132633
NCBI-ProteinID:
XP_029521224
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Position
LG7:complement(50132740..50142174)
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AA seq
1101 aa
AA seq
DB search
MVNSEPTRELVDETHEDLDEMEEMRCEMLEMRDLFLEDEVCQLQELRLQLEQANKLCRIL
QYRLHKAERRSLRVAQTGQVEGELVRSLEHDVKVAKSVSLRLHNELESVQQKNSRLEREN
DALRERQQELEVAKQVQQGEMEKARESSLKRKNVRSPNSKIEKTLSPQDDSADLKCQLHF
AKEESALMCKKLSKMVSESECMREVLSKYRSAYGDVDAAAHSSEGGTAKSPHTREAEVKV
HLRLVEEEATLLSRRIVELEVENHGLRAEMSDMRESVLGGGGEEKEEQTQKGARDNGDLP
PLYVRDVEDCEQSLRRECMQFEQEKREQQRRSVIECFQEEVMEIQRRDQPQTERLSPLSQ
IPRKGSVGGEWEPLDNQQSYTRRGSVAHTLNVKDHEALLVLRDHACLVTSAIQLFVSPAK
NGHSSPPLSPHISRAKSYPQGKAQPLALDPLMQGHLHETLELLQAMLLALMGRVELLVTQ
GGELRVEGNWDPTAIPSLADQDTQNNTEVSAKKETGEGLHTVVVKESVRRATQSDHLDSC
RDPMMKLTLKVLWVLHQRGVGKRSGLEGKESRDLTTMSILHGLLQYLGTELQDSEDSMAG
QDAKATWASDWKGLVSKMECSTGKTEAQEYPDQPGHPRGIQSEKTETRNKTKPDRSILGS
KKKNWCYLSQEAAQLDREDPFKTWDHPIMPPSFPNLNLDQLTLDSSCTAPEKTVLRIYYS
PLSARRVHLAHLRHITNTDRNSTTSVISARLSTSQNSLTPLCLRVSANLSDDMKEMTASL
RQAVHSSSPERRKGRVIVSGGWTVDVATTGTQTQMHPQMVSVGLQTDGPYSVSAVRGNPL
RLSARTQQISTSLERLPGRTERSKSGSTSPKMYRRYSASASSSSSISPSSTTGFTTTSIS
STSSSATPGREGVLWSLSHLGPAGPTWARPINPRAGPRLIHHSTINSELSSGGNNTKPTR
KPGGANRYGLVTEFLRKMSGRADKPAQATAPGGGQKGKCSPTHKTLEVVTTRRPAAPVHR
NDSVARIGNQRFMKQREEACRGQKEDNCPSQAHSQNQALRRDLNLESKLTLEDGNYDCSS
SKSLSFCFARSSRLGPDQATA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattcagaaccgacccgggagctcgtggacgagacgcacgaggatcttgatgag
atggaggagatgcgctgtgagatgctggagatgcgggatctgttcctggaggatgaggtg
tgtcagcttcaggagctgcggctgcagctggagcaggccaacaagttgtgtcgcatcctg
cagtaccgcctccacaaggccgagcgccgcagcctcagggtggcccagactggccaggtg
gaaggggaactggtccgctccctggagcatgacgtcaaggtagcaaagagtgtatccctc
cgcctgcacaatgagttggagtccgtgcaacagaagaactcccggctggagcgggagaac
gatgcgcttcgggagaggcaacaggagctggaggtggcaaagcaagttcaacagggcgag
atggagaaagccagagaaagttctctgaagaggaaaaatgtcagatcaccaaacagcaag
attgagaagacgctgtctccccaggatgacagtgctgatctgaagtgccagcttcacttt
gccaaggaggaatcagctctcatgtgcaagaagctgagcaagatggtgtcggaaagtgag
tgcatgcgtgaggttctgtcaaagtaccgctcggcctatggagacgtagatgctgctgcc
cactcctctgagggtggtactgccaagtccccccacaccagggaggcagaggtcaaggtt
cacctgcggctggtggaggaggaagcgacgctgctgagccgccgtattgtagagctggag
gtggagaaccatggcctccgggcagagatgagcgacatgagggagagcgtattaggagga
ggaggagaagagaaagaggagcagacacagaagggagccagggacaatggggatctacca
ccgctttatgtgagggatgtagaggattgtgaacagagcttgaggagggagtgtatgcag
tttgagcaggagaagagggaacagcagagaaggagtgtgattgagtgttttcaggaggag
gtgatggaaatacagcgtagagaccaacctcagacggagaggttgagtcccctcagtcag
atccctcgaaaggggtctgtaggtggggaatgggagcccctggacaaccagcagagttat
acacgcagaggcagtgttgcccataccttgaatgtgaaagaccatgaggccctccttgtc
ttgcgagatcatgcctgccttgtaacctcagctatccagctttttgtctcaccggccaag
aatggccacagctcccctcccttatctccccacatctctcgggcaaagtcttaccctcag
ggtaaagcccagcctctggctctggacccactcatgcaaggacaccttcatgagactctg
gagctcctgcaggcaatgctgttagccttaatggggagggtggagttattggtgacacaa
ggaggagagttgagggttgaaggaaattgggatcccaccgcaatcccatccctggctgat
caggacacacaaaacaacacagaggtctcagccaagaaggaaacaggtgaaggcctgcac
acagtagtggtgaaggagagcgtaagacgagcaacacagtcagaccacctcgacagctgc
agggaccccatgatgaagctcactttgaaggtgctctgggtcctccaccagcgtggtgtg
gggaagagatctggcctggagggcaaagagagcagagatcttacgactatgtctatacta
cacgggttgctgcagtacttgggcacagagctgcaggactcagaggacagcatggcagga
caggatgcgaaggccacatgggcatcagactggaaaggcttagtctccaagatggagtgc
agcactggtaagactgaggcacaggagtatccagaccagccaggccatcctagaggaata
cagagtgagaaaactgagacaagaaataagaccaaaccagaccgctctatattaggttcc
aagaagaagaactggtgttacctcagccaagaggctgcccagctagacagagaagacccc
tttaagacctgggaccaccccatcatgccccctagcttccctaatctaaacttggaccag
ttgacactggacagtagctgcactgccccagagaagactgtcctccgcatctactacagt
cccctgtctgcacggagagtccatctagctcatctgagacacattaccaacactgataga
aattctactaccagtgtaatctctgccaggcttagtacgtcccaaaactctctcactccc
ttatgtctgagggtctccgctaacttgagcgacgacatgaaagagatgacagctagctta
cgacaggcagttcactccagttcgccggagaggaggaaggggagggtgattgtgagtggg
ggatggacagtggacgtggccaccacagggactcagacccagatgcacccacagatggtg
agtgtgggtctacagacggatgggccctacagtgtaagtgcagtgagaggcaacccttta
cgcctctctgcccgcactcaacagatctcgacttcccttgagaggctcccagggaggacc
gagaggtccaagtcaggctccacctccccaaaaatgtaccgcagatactctgcctctgct
tcatcttcatcgtccatctccccttcctccacaactggtttcaccaccacctccatctcc
tccacctcctcctctgccactcctggcagggagggtgttttgtggagcctttcccatctg
ggtcctgctgggccaacctgggcccgccccatcaatcccagagctggtccaaggcttatt
caccatagcacaataaacagtgaattgagcagtggagggaacaacactaaacccaccaga
aaacctggtggtgccaaccggtacggcctagtcacagagttcttgcgcaaaatgagtggt
cgagcagacaagccagcacaagcaacagcaccgggcggggggcagaaggggaaatgcagt
ccaactcataaaaccttggaggttgtgaccactcgacgccctgctgcaccagtacacagg
aacgacagtgtcgccaggattgggaaccagaggttcatgaagcagagagaggaagcgtgc
cgcggccagaaggaggataactgccccagtcaggcccacagtcagaaccaggctctcaga
agagacctgaacctggagagtaaattgacactggaggatgggaattatgactgtagcagt
tccaagtccttgtccttctgctttgcccgatcatctcgccttggccctgaccaagctaca
gcataa
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